Primulina eburnea: 140838141
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Entry
140838141 CDS
T11060
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pebu Primulina eburnea
Pathway
pebu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140838141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pebu03041
]
140838141
03009 Ribosome biogenesis [BR:
pebu03009
]
140838141
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140838141
Spliceosome [BR:
pebu03041
]
Complex A
U1 snRNP components
U1 related factors
140838141
Complex B
140838141
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Helicases
140838141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
CvfB_2nd
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
140838141
NCBI-ProteinID:
XP_073060327
LinkDB
All DBs
Position
8:555838..562153
Genome browser
AA seq
755 aa
AA seq
DB search
MAATVTSSSTGVRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNTTQYERPVASLHASCV
PSQKCLSPCLEKPLQGHHNGNDDDKINDDSSDGGLTKVESIAGAYQNARSKSDYSLNDSD
AKAGVGRGQCVSKGAECSLSAESYRRQHEITVNGVDVPQPFTSFQATGFPSEILREVQSA
GFSAPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPGFIHLKRRQNNPRLGPTVLVL
SPTRELATQIQDEAVKFGRSSKISCTCLYGGAPKGPQLRDLDKGVDIVVATPGRLNDILE
MRRVTLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPKEVRRIAADL
LVNPAQVNIGNVDELVANKAITQYVEVLSPMDKRKRLEQILRSQEPGSKIIIFCSTKKMC
DLLAGNLTRQFGAAAIHGDKSQGERDHVLSQFRNGSSPVLVATDVAARGLDIKDIRVVIN
YDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKHAPELVKLLQGANQRVPPEILDMS
SYGGGGGMGRGRRWSSGPNEHDTGYGGGRSSCSGRYGGSGGWGMSSSPDRVGGRNNDHGQ
QNRHGFESSAVQDSIATGSLPYKSFHETMMAAAKNREESPSRSRSPTRNSGWGDNHDRAR
SRSRSSERFDGAAATATRFSYHESMLAQPRSSHSKPTSFHENSPSSPNTDNALGRSSPKR
FGNDESKPSYKGQQEETTLSAEANTMNTSMFQTTA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccgctactgtaacttcctcatccactggtgtgaggtatgcacctgacgacccaaca
cttccaaaaccatggaggggcctggttgacggtaaaactggatatctttacttctggaat
cctgagactaatacgacgcaatatgagaggccggttgcctctttgcatgcaagttgtgtt
ccatctcagaaatgtctaagtccatgcttggaaaagcctcttcaaggacaccataatggc
aatgatgatgataaaataaatgacgacagtagcgatggtggccttacaaaggttgagtca
attgcaggagcatatcagaatgccagaagcaaatcagattattcactgaatgattcagat
gccaaagctggtgttggacgtgggcaatgtgtttctaaaggtgcagaatgtagtttgtcg
gcagagtcttatcgccgtcagcatgaaataactgtaaatggagttgatgttcctcagcct
tttacctcatttcaagccactggttttccttcagagatattgagggaggttcaaagtgct
ggtttttctgctcctactccgatacaggcacagtcatggcctattgctttgcagaatcga
gatatagtagccattgctaagacaggctctgggaagacattgggttacttaattcctgga
tttattcatctgaaaagacgccagaataatcctagattgggtccaacagtcttggtgctt
tcaccaacaagagagttggctactcagatacaagatgaagctgtgaagtttggaagatcg
tctaaaatatcttgcacttgcttatatggtggtgcgcctaaaggtcctcaactgagagac
ctagacaaaggtgttgatatagttgtggctactcctggtcgcttaaatgatattctagaa
atgaggagagtcacgctccatcaagtttcatatttggtgttagatgaggcagacagaatg
ctggacatggggtttgaaccccagataagaaaaattgtcaaggaggtgccttctcgaagg
caaaccttgatgtacacagcaacttggccaaaggaggttagaagaattgctgctgattta
ctggttaaccctgctcaggttaacattggaaatgttgacgagcttgttgcaaacaaggct
ataacccagtacgtggaggttttgtcaccaatggataaacgcaagcgactggaacagata
ttgaggtctcaagaaccgggatcaaagataattattttttgctctacgaaaaaaatgtgc
gaccttcttgcagggaacttaacccgtcaatttggagctgctgctattcatggagacaaa
tctcaaggcgagagggatcatgtcttgagtcagtttcgtaatggaagttctcctgtgctc
gtagctactgatgtcgctgcccgtggtctggacattaaggacatcagggttgtgataaat
tatgactttcctaccggaatagaggactatgttcacaggattggaagaactggacgagca
ggtgccactggagtggcttatacctttttctgtgaccaggattcaaagcatgcaccagag
cttgtcaaactcttgcaaggagcaaatcaacgcgttcctcctgaaattcttgatatgtct
tcttatggtggtggtggaggaatgggaaggggaagacgatggagctcaggtcccaatgaa
catgatacaggctatggaggtggtcgatcttcatgtagtggaagatatgggggaagcggt
gggtggggaatgtcatcatctccagatagggtaggtgggcgtaataatgaccatggacag
caaaataggcatggttttgaatcctctgctgtgcaagattcaattgccactgggagcctt
ccttacaagagctttcatgagaccatgatggctgctgcaaagaacagggaggaaagccca
agtcgcagcagaagcccgaccagaaactcaggatggggtgataaccatgacagagctcgc
agtcgaagccgtagcagtgagagatttgatggggcagctgctactgccacccgatttagt
taccatgaatccatgttggcacagcctcgatcatcacattctaagccaacctcctttcat
gaaaattcaccttcttcacccaatactgataatgcattgggtagatcatcacccaagcga
tttggcaacgacgaatcaaagcctagttataaagggcaacaggaggaaacgactctgtca
gcagaagcaaacacgatgaatacgagcatgtttcaaacgacagcttga
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