Primulina eburnea: 140838614
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Entry
140838614 CDS
T11060
Name
(RefSeq) cleavage stimulating factor 64-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pebu Primulina eburnea
Pathway
pebu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140838614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140838614
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
140838614
U7-dependent histone pre-mRNA processing factors
140838614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_occluded
partial_CstF
RRM_10
Motif
Other DBs
NCBI-GeneID:
140838614
NCBI-ProteinID:
XP_073061154
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Position
8:complement(4955099..4960276)
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AA seq
493 aa
AA seq
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MAAAPQSQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVTDRETGKLKGYGFCEYKD
EETALSARRNLQGYEINGRQLRVDFAENDKNADKNREQVNQGGTSIASNIDPQKQVGGPV
ARGDLNLYRPLGDSVAMAAATVMAGAIGAAQTANSSDQIGLQTQALSGIDPLTRHLAKMS
RNQLTEIMAELKAMATQNKEEARQVLLAIPNLPKALFQAQIMLGMVSPQMLQMANISQPS
AESMQHLVQSGQTLPGLPPLPQNKPHFGLLPASRESQMSVSAPKQYAQITHVPTQSQIQH
SQLMQNQIPHQAQLLVQSGISSLPSVRPQLSGGLSVRPQIHVPISSSLNQQAQPSMSRQS
ISSAILENKDSKGLALSSLEKAIIVNNNQDQVIRAPKLVKLNDGRGTSLSEDANMHMQVS
AASQMVDLSGKQIFQAEESSKSEKQASKMQLPLDVDSALLEQVLNLTPEQLSSLPPDQQQ
QVIQLQKMLRQAA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctcctcaatctcagcatcgctgcgtatttgtggggaacataccttatgat
gcgactgaagagcagctcattcaaatatgcgaggaagtcggtcctgttgtttctttcaga
ttagttactgatagagaaactgggaaactgaagggttatggattttgtgaatataaggat
gaagagacagctttaagtgctcgtcggaatcttcagggatatgagataaatggtcggcag
ctaagagttgactttgctgagaatgacaagaatgctgacaagaaccgagagcaggtaaat
caaggtggtaccagtattgcttcaaatattgaccctcaaaaacaagttggaggcccagtg
gcacgtggggatctgaatctttacaggccattgggtgattctgttgccatggctgctgca
actgtcatggctggagccattggagccgctcagactgctaactcatctgatcagatcggg
ttgcaaactcaggccctatcgggcattgatcctttgactcggcatttggccaaaatgtct
aggaaccagttaacagagattatggctgaattaaaggcaatggctacacaaaataaagaa
gaggcccggcaggtcttacttgccatcccgaacttgccaaaagctctttttcaggcccag
ataatgcttgggatggtttctccgcaaatgttgcagatggcaaatattagccaaccctct
gccgagtcaatgcaacacttagtgcagagtggtcaaactcttcctggattgcctcccctt
ccacagaacaaaccacattttggtttgttgccagcttcacgtgaaagtcaaatgtctgtt
agtgcaccaaagcagtatgctcagataacacatgtgcctacacaatctcagattcaacat
tcacaactaatgcaaaatcaaattccacatcaagctcaactgcttgtgcaatctggaatt
tcatcccttccatctgttcgtccacagttatcgggtggcctgtcagtcagaccacaaatt
catgtgccaatttcctcttcattgaaccaacaagcgcaaccatcaatgtcacgacagtct
atatcctcagctatattagagaacaaggattcgaaagggcttgctttgagttcattggag
aaagcgataattgtgaataataaccaagatcaagtgattagagcacctaaactggtgaaa
ttgaatgatggaaggggtacctctttatcagaagacgcaaatatgcatatgcaagtttct
gcagcatcccaaatggttgatctttccggaaaacaaattttccaagcagaagaatcttca
aagtctgagaagcaagcctctaagatgcaacttcccctcgatgtagattctgcgttactt
gagcaagtgctgaatctgaccccagagcagctgagttccctgccgccagatcagcagcag
caagttattcaactccagaagatgctccggcaagctgcatga
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