Primulina eburnea: 140838616
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Entry
140838616 CDS
T11060
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
pebu Primulina eburnea
Pathway
pebu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140838616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140838616
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140838616
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4854
COG3_N
FapA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
140838616
NCBI-ProteinID:
XP_073061163
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Position
1:62232683..62249104
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AA seq
874 aa
AA seq
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MAGTNFGFSTTSSFSSSSSSPYPFSFGFSNPSSNPTSTTSAISFGVGSGTASSTTGSSAT
PFGGSSMFGSSPSPASNLFGSSTGAGLTSNTFGSSSASGSTPTSNFLSGTTPSSFGSSAS
ASTSNFFGSSLSGSAPTTNIFGSGSAPSMFGSSSTASSTSSPFGSSLSGSASSSNFFGSV
PAPNILGSSSAAPASIPFGSPSLGTGNPANVFGSSSAAVVGSPSPSSSPFGTSTLFASPA
PGSSNLSGSSNAPTSNPFGFFSGASNSSTTTPSFGSGLAASSNLFGSSLSSSNTANTAPL
SESGPIPASNVFDGKFPAGGLFAPSTPSFPTNVASVGNTPSFGSSSGSTLGLLGSSSSMF
SSSPVTLFGSLSTSSSATSSPLPINASSSASSASGFSFATASSSLGNAPLFGSSSASTLG
LTGSSSSIFSSSPAPLFGSSSSFTTATSFPAPTNASSSASSAPGFSFASASGSPGFSFPA
ASAAGLGTAATTPAASFSTAPTSVSSGFSFLKSTTGLATGAASSSTLPSFGTTGFQSSTL
TSPLSSVPTSKATAAGTTPSATTASFLSAATASSTASSGFTGFSAASAPALSSGASSAFS
LSLKSPIAASSVSSQPQSVSTLPSLGVASTTPISATPGSSAQTTSSLVVSSSSGTTSTTS
TALASAPKLPSEITGRTVEEIIKEWNAELQERAGKFQKQANAIAEWDRRILQNRDILLTL
ESEVAKVVKTQDSLERQLELIETYQDEVDKALESMEEEAERIYSEERGLLLDDEAASTRD
AMYEQAEMIERDLEHMTEQIKSIINSINANKGGGLDATDGMTPLDVVVRILNNQLSSLMW
VDEKAEEFSSRIQKLANQGSATEHELTRPKLWLN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacgaactttggcttctccacaacttcctcattttcgtcttcttcgtcgtcc
ccttatcccttttcgtttggcttttcaaaccctagttcaaaccccacctcaaccacttcc
gcaatttccttcggcgttgggtcgggaacggcatcttccaccaccggatcatctgcaacc
ccattcggaggttcctcaatgttcggctcgtcgccttctcccgcctccaatttattcggg
tcttctaccggtgcaggcctcacatcaaatacatttggatcatcttctgcatcaggttcg
actccaacatccaattttttgtctgggacgactccgagctctttcggatcttctgcttca
gcaagtacttccaatttctttggatcctctttatctggttcggcgccaacaacaaatatt
ttcggttcgggttctgcacccagcatgtttgggtcttcttctaccgcgtcttccacctct
agtccttttggttcatcattatctgggtcagcctcctcttcgaacttttttggatcagtg
ccagctccgaacattttggggtcctcttctgcggctcctgcttcaattccttttggatcc
ccatctttgggtacgggtaatcctgctaacgtgtttgggtcgagttctgctgctgtggtc
ggatcgccatcgccttcatcatcaccatttggtacctcaacattatttgcatcccctgct
ccgggatcttcaaacttatctgggtccagcaatgccccaacttctaaccctttcggattt
ttctctggagcttctaatagcagtaccaccacaccgtcatttggatctggtctagccgca
tcgtccaacctattcggatcgtctttatcatcatcaaatactgcaaacactgctcccctg
tccgagtcaggtccaatcccagcgtcaaatgtttttgatggtaagttcccagctggaggc
ctattcgccccctccacaccttcatttccaacaaatgtagcatcagtgggaaatacacca
tcgtttggatcaagctctggatcaactttaggccttttgggttcctcttcgtccatgttt
agttcctctccagttactttgttcggttcgttaagcacttcctcctcagctacatcatcc
ccattacctatcaatgcttcaagctcagcttcttcggcatctggattttcatttgccact
gcatctagttctctcggaaatgcaccattatttggatcaagttctgcgtcaactttaggt
cttacgggttcctcctcatccatctttagttcatctccagctcccctgttcggttcatcg
agctctttcaccacagctacatcattccccgcacctaccaatgcttcaagctcagcttct
tcagcacctggattttcttttgccagtgcatctggttctcctggattttcgttccctgca
gcatcagctgctggcctgggaactgctgctactacacccgctgcttcattttcaacagcg
cccacttctgtttcttctggtttttcatttttaaagagcactaccggtttagcaacagga
gcagcttcatcatcgactttgcccagttttggcactacagggtttcaatcctccacttta
acatcgcctctgtcaagtgtgcccacatcaaaagccactgcagctggtaccaccccttca
gctacaactgcttcatttctatctgctgctaccgcatcttctactgctagttctggtttc
acgggtttcagcgctgctagtgcgcctgcattgtcatctggagcttcaagtgccttctct
ttatctttgaaatcacccatagctgcatcctcagtgtcatctcaaccacaatcggtttct
actctgccttctctaggtgtggcttcaacaactccgataagtgcaactcccggttcttct
gctcaaacaacatcatcccttgttgtatcttccagtagtgggactacttcaacaaccagt
acagcattagcctctgcacccaagttaccgtctgaaattactgggagaactgttgaagag
atcatcaaggaatggaatgctgaactacaggagcgggctggaaaatttcagaagcaagct
aatgcaatagctgagtgggaccgtaggattttgcagaatcgtgatattcttctcacactt
gagagtgaagttgcaaaagttgttaagacccaggatagtttggagcggcagttggagcta
attgaaacttatcaagatgaggttgacaaagccttggaaagtatggaggaagaagccgag
cgtatatacagcgaagagcgtggattactgcttgatgacgaggctgcatctaccagagat
gcaatgtacgagcaggctgaaatgatagaacgagacctggagcatatgactgaacagatt
aaatctattatcaattctattaatgccaacaaaggtggagggcttgatgccacggatgga
atgactccactggatgtcgttgttcgtatcttaaacaaccaactgagttcattgatgtgg
gttgatgaaaaggcggaggaattctcttcacgtatccagaagctcgcgaaccagggttca
gctacagagcacgaattgacgcggccaaagctatggttgaattga
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