Primulina eburnea: 140838713
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Entry
140838713 CDS
T11060
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pebu03009
]
140838713
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140838713
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
90S particles
Helicases
140838713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
nSTAND3
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
140838713
NCBI-ProteinID:
XP_073061323
LinkDB
All DBs
Position
8:5938898..5952774
Genome browser
AA seq
1447 aa
AA seq
DB search
MRRHHSAHNGPISALQNLDPNSFSERTEGAIGLTLNRIDHPAGQQTREFFVEIHLGRQSS
KGQPQGKMPMNKPSFKRDSELSPLEHSPAEPSVSPSCISKGRSSFALSWVSLFYDLHSHF
RNKTRSNIRARVFMMPQLDNLDLGTDLTRAGYGGGDIIMLPGKKKKEKRVKKQVPNRMMN
KPKELSKSQKRKLKKLEEDKDKETLLEKSIDILERYKIRDDVYSLMCSSRNLGQVETALE
KRRREANFLKAGLELAESDRPLKKRTSDDPSFHVEQCENILMPQPINDLSNLKRSTAEKE
AMHDATVSAKEMVNETIAPSRTELSQKPVPSSCIYEEIMKLELKPVDTLHRDPKNSLAGP
SNQDNCYFVRSLCTPTVVHVSRPKEVEMTRRDLPIVMMEQEIMEAINDHNSVIICGETGC
GKTTQVPQFLYEAGFGPNHVHTRRGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQV
RHDRRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIK
ERQREFEEQHKRIISGETIEFENRIYPLKLVLMSATLRVEDFVSERRLFHDPPPIIEVPT
RQYPVTIHFSKRTEIVDYIGQAFKKVMSIHKKLPPGGILVFVTGLREVEYLCRKLRRSNK
TFSVNEEKPSEEIDMKEITDAFDCQGDFDDETPDHFSVHMEENHGNLLEDEYDNTYNSSE
ESDLEFYSDDENYSKSMSAESDGKLVDILGVDGGIDSLKAAFEALARKNGPLPDNTTQNV
TKTLEGGPKQSSSIAEKSVEDKVFCTGALRVLPLYAMLPAPAQLRVFEEVKEEERLVVVA
TNVAETSLTIPGIRYVVDTGREKVKIYNSSNGMESYEIQWISKASAAQRAGRSGRTGPGH
CYRLYSSAVFNNMFPDFSSSEILKVPVDGVVLLMKSMHIGKVANFPFPTPPETNALVEAE
NCLKVLEALDSNGRLTPLGRAMSLYPMNPRHSRMLLTVIQTMQKVKDSSRASIVLGYAVA
TAAALSSSNPFIMQVEGSHIDSNDSKHAEKDGSLESENIRDKGEKARRKKLKEIAKASRE
KFCNPTSDALTIACALQCFELSENPVEFCSESALHYKTMEEMSKLRKQVLQLVFSSSKSD
LQRDFLWTHGTLKDVECSWKIPSNKHHLLLNEEDILAQAICAGWADRVARRIKAASVVLD
GERKVKSVRYQACMVKETVFLHRWSSVSKSPPEFLVYNDLLYSKRPFIHGATSVRSNWLL
KYAQPLCSFSAPLSDPKPYYDPITDQVFSWVTPTFGPHLWQLPLHGLPIKDNFNRVVVFA
CSLLEGQVLPCLKAVRKYLAVPPSSILKREALGLKRVGNLLSKMSLRGRVIDSCTKLRNL
WNENPAELFPEIRDLFQEGFHMQFEELWVVMLHQINLDQEERFPVRAKGEKRKKLDFQVI
KPIFVCP
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgacaccattcagcccataacgggcccatctcagctctacaaaatctcgatccc
aattccttcagcgagagaacagaaggcgccatcggactcactctcaatcgaattgatcat
ccagcaggccaacaaacaagagaattttttgtagagatccaccttggaagacagtcctca
aaaggccagccacagggaaaaatgcccatgaataagccatcttttaaaagagattcagaa
ctttcaccattagagcacagtcctgcggagccctcagtatctccctcttgcatctccaaa
gggcgctccagttttgctttgtcgtgggtatctctattttatgatttacacagtcatttc
cggaacaaaactcgtagtaatattcgggctcgggtgttcatgatgccgcagttggataat
ctggacctgggaacagatttgacaagggcgggatatggtggtggagatattatcatgtta
ccaggaaagaaaaagaaagaaaagagggtgaaaaagcaggtacccaatcgcatgatgaat
aagcctaaggagctaagcaaatcccagaaaagaaagttaaagaagctcgaggaggacaaa
gataaggaaacgcttctcgagaaaagcatcgatattttagagaggtacaagattcgagat
gatgtttattcccttatgtgctcttcaaggaatttgggtcaggttgaaacagctcttgaa
aagcgtaggagggaagccaactttttgaaagcaggtttagaattggcggagagtgatcga
ccattaaagaagaggaccagtgatgatccatcttttcatgtggaacaatgtgagaatatt
ttaatgccacaaccaatcaacgacctgagcaatttgaagcggtcaacagcagaaaaggag
gcgatgcatgatgctactgtttcagccaaggaaatggttaacgagactattgcaccatct
aggacagaactttcacaaaaacctgttccttcaagttgcatctatgaagaaattatgaag
cttgagttaaagcctgtggatacactgcacagggatccaaaaaacagtcttgctggtcca
agtaatcaagacaactgttattttgtaagaagtctctgtactccaactgtggtgcatgtg
tcaaggccaaaggaggtggaaatgacaagaagggatcttcctattgtcatgatggaacaa
gaaataatggaagctattaatgatcacaatagcgttattatatgtggtgagactggttgt
ggtaagaccacccaagttcctcagtttctttatgaggctggttttggcccaaaccatgtg
catactcgtcggggaattattggcgtcacccaacctcgccgagttgcagtgcttgcaact
gctaagcgtgtggcttttgagcttggtcttcgtttgggtaaggaagtaggttttcaagtt
agacatgacagaaggattggagataattgctcaatcaagttcatgacggatggaatcttg
cttcgagaactgcagaatgattttctattgaagcgctactctgttataattttggatgag
gcacatgagagaagtttgaatacagatatactcatcgggatgctttctcgagttatcaaa
gagcgtcaaagggaattcgaggagcaacataagagaattatttcaggggaaactattgaa
tttgaaaataggatatatccgttgaaacttgttctaatgagtgcaacactgcgggtagaa
gattttgtgtctgagagaagactttttcatgaccccccgcctattattgaagttccaact
cgacagtatccagtcactatacatttctcaaagagaacagagattgtagattatattggt
caagcttttaaaaaagttatgtcaattcacaagaaactaccacctggcggcattcttgtt
tttgtgacaggactgagagaagtagaatacctttgtcggaagttacgtaggtctaacaag
acattttctgtaaatgaagagaaaccttctgaagaaattgatatgaaagagatcactgat
gcatttgattgtcaaggagattttgatgatgagactccagatcattttagcgttcacatg
gaggagaatcatggcaacttattggaagatgaatatgataacacctataattcaagtgaa
gagagtgatctggaattttatagcgatgatgagaattattcaaaatcgatgtctgctgaa
tctgatggtaagcttgtggatattttgggagtggacggaggcattgattctttgaaggct
gcttttgaagccttggccaggaaaaatggtcctttaccggacaatacaacccaaaatgtt
accaaaacacttgaaggaggcccaaaacaatctagttccattgctgagaaaagtgtggag
gacaaggttttttgtactggtgcacttcgggttctgcccctttatgccatgcttcctgca
ccagcccagcttcgtgtatttgaagaggtaaaggaagaagaacgtcttgttgttgttgca
actaatgtggctgagacctctttgaccattcctggaataaggtatgttgttgacactgga
agggagaaggtcaaaatatacaactcttccaatggtatggaaagttatgagatacagtgg
ataagtaaggcttctgcagctcagcgtgctgggagatctggaagaactggacctggacac
tgttatcgcctatattcttctgcagtcttcaacaatatgtttccggacttctctagttct
gaaatattaaaagttccggttgatggtgttgtcctccttatgaaatccatgcatattggc
aaagtggctaattttcctttccctacacctcctgagaccaatgctttggttgaagcagag
aattgtttgaaggttcttgaggcactagattcgaatggaagattgacccctctagggaga
gctatgtctctctatcctatgaatcctcgtcattccagaatgctcctcactgttattcaa
actatgcaaaaggtgaaagatagtagtcgagcaagtatagttttgggctatgcagttgca
acagctgcggcgttgagctcgtcaaatcctttcatcatgcaggttgaaggaagccatatt
gattcaaatgattcaaagcatgccgagaaagatggttctttagaaagtgagaacatccgt
gacaaaggagagaaggcaaggagaaagaaattgaaagaaatcgccaaagcttctcgtgaa
aagttttgtaacccaactagcgatgctttgaccattgcctgtgcacttcagtgttttgaa
ctttctgaaaatccggttgagttctgcagtgagagtgctttacactataaaaccatggaa
gaaatgtccaagctgagaaaacaggttcttcaactagttttcagctcaagtaagagtgat
ctgcagcgagactttttgtggactcatggtactctcaaggacgtggaatgttcttggaaa
attccctcaaataaacatcatcttttgctaaatgaggaggacatcttggctcaggctatt
tgtgccggttgggctgatagggttgctaggcgcattaaagcagcttctgttgtgttagat
ggagagagaaaagttaaatcagtaaggtatcaagcttgcatggtcaaagaaacagttttc
ctccatcgttggtcatctgtttctaaatctccccctgaatttttggtttacaatgattta
ctgtatagtaaacgaccatttattcacggtgccacaagcgtgaggtcaaattggcttctt
aagtatgcccagccactgtgtagtttctctgcacccctttctgatccaaaaccatattat
gacccaataaccgatcaggtcttctcttgggtgactcctacctttggtccccatctgtgg
cagcttcctctgcatggtttacccatcaaagacaattttaatcgagtggtggtgtttgct
tgttctttactcgaagggcaagttttgccatgcctaaaggctgtccgtaaatacttagct
gtcccaccttcaagcattttgaaacgagaagcattgggccttaaacgggtgggaaatttg
ttaagcaaaatgagtttgagaggaagagtcattgacagttgtactaaattaagaaatttg
tggaatgaaaacccagcagagttgtttcctgaaattagagatttatttcaggaaggattc
catatgcagtttgaagaactctgggttgtgatgctccatcagatcaacttagatcaggaa
gaaagattccctgttagagccaagggggagaaaaggaagaaattggactttcaggtaata
aaaccgatatttgtgtgtccatga
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