Primulina eburnea: 140838795
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Entry
140838795 CDS
T11060
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pebu Primulina eburnea
Pathway
pebu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140838795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140838795
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140838795
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
DUF7885
F-box
Motif
Other DBs
NCBI-GeneID:
140838795
NCBI-ProteinID:
XP_073061450
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Position
8:7682291..7687601
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AA seq
590 aa
AA seq
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MDPNPKKPNISIPDSTIPNGSTHAYLPFPDEVLEKVLSFIDSHKDRNSVSLVCKNWYNAE
RWTRTNLFIGNCYSVSPEIVARRFPRIKSVILKGKPRFSDFNMLPRDWGADVNPWLVMFA
KVYPFLEELRLKRMTVSDDSLELLAKSFLGFKALSLSSCDGFNDDGLNAIATHCMNLTEL
NIQDNVTGDIGGGWLSCFPDNFVSLEILNFASLNSDVSFDALERLVSRCKSLRVLKVNES
VNLEQLQRLLALAPQLMELGTGSFMQELTPRQCEDLEISFRNCKDLHALSGLWEVTSLYL
PALYEACAGLTFLNLSDAALQSVEVSKLLAHCPNLRRLWVVDTVEDKGLEAVGSNCPLLE
ELRVFPADPYDRHHRHGVTDSGFLAVSRGCRKLHYVLYFCRRMTNAAVVTVVQNCPDFTH
FRLCIMNPGQPDYLTNDPMDEAFAAVAKTCTKLRRLSVSGLLTDLTFEYIGKYAKNLETL
SVAFAGTSDWGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYERMRSLWMSACNLTMK
GCMLLARKMPRLNVEVIKDEESDDSQADKVYVYRSIAGPRQDAPPFVLTL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaccccaagaaacccaatatttcaataccagattcaactatcccgaacgga
tcaactcacgcttacttgccatttcctgatgaagtcttggaaaaagttctctcattcata
gattcacacaaggatagaaactcagtctccctcgtctgcaagaattggtataatgcagag
agatggacaagaacaaatctgtttataggcaactgctattctgtatctcctgagattgtg
gctagaaggtttccaagaattaaaagtgtaatacttaaaggaaaacctagattttccgat
ttcaatatgttacctagagattggggcgctgatgtgaatccttggttggtcatgtttgca
aaagtttacccttttttggaggagctaaggttaaagagaatgactgtcagtgatgacagc
ttggagctcttggctaagtcatttctgggcttcaaggctttatctttgtcaagttgtgat
ggtttcaacgatgacgggctcaatgccattgccactcattgcatgaacttgacagagctc
aacatacaagacaatgtaactggggacattggtggaggttggctaagttgctttccagat
aacttcgtctcattagaaatactaaattttgctagccttaacagtgacgtaagttttgat
gccctcgagaggcttgttagtcgatgcaaatctttaagagttctgaaggtcaatgagagt
gttaacttggaacaattacaacggctccttgcacttgctccccaattaatggaacttggt
actggctctttcatgcaagaacttacgcctcgccaatgcgaagatcttgagatttctttt
agaaattgtaaagacctccatgctctttcgggtttatgggaagtcacctctctctatctt
cccgcactttacgaagcttgtgccggtctaactttcttgaacttaagtgatgctgctctt
caaagtgtcgaagtttcaaaacttcttgctcactgccccaatttacgacgcctttgggta
gtcgatacggttgaagacaaagggcttgaggctgttggatccaactgccccttgctcgaa
gaactccgagtcttccctgctgatccttatgacaggcatcatcgccacggggtgacagac
tcgggattcttggccgtctctcgtggatgtcgcaaactccactatgtcctttacttttgc
cgtcggatgactaatgccgctgtagtgaccgtagtccagaactgccccgattttactcat
ttccgtctttgcataatgaatcctggccagccagattacctcacaaatgatcctatggat
gaagcatttgcagctgtggctaaaacttgcactaaacttcggaggctatcagtttccggt
cttctgactgatcttacattcgagtatattgggaaatatgccaaaaatctggagacactt
tctgtggcttttgctggcaccagcgattggggaatgcagtgtgttttagaaggttgtcca
aagctaagaaagctcgagataagagattgcccatttggtaatgctgcgcttctatctggg
ctcgagaaatacgaaaggatgcggtctttgtggatgtctgcctgtaatttaaccatgaag
gggtgcatgctgctagcaagaaagatgccaagattgaatgttgaagtaatcaaagacgag
gaaagtgatgacagtcaagctgacaaagtttacgtttatcgttccatagcagggccaaga
caagatgctcctccttttgttctcactctttga
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