Primulina eburnea: 140839819
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Entry
140839819 CDS
T11060
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pebu Primulina eburnea
Pathway
pebu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140839819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140839819
03009 Ribosome biogenesis [BR:
pebu03009
]
140839819
04131 Membrane trafficking [BR:
pebu04131
]
140839819
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140839819
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140839819
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140839819
Membrane trafficking [BR:
pebu04131
]
SNARE
SNARE associated proteins
Others
140839819
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140839819
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140839819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_22
AAA_33
AAA_5
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
Vps4_C
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_lid_PRS2_C
AAA_7
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
140839819
NCBI-ProteinID:
XP_073062878
LinkDB
All DBs
Position
8:41245420..41249954
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKIIETDPSEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDAA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKNTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFETALGTSNPSALRETVVEVPNVSW
EDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSAGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKASLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRSEN
PEAMEEDVEDEVPEIKAAHFEESMKYARRSVSDADIRKYQAFSQTLQQSRGFGTEFRFAE
NSSGVAASDPFAPSAGAADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaagccgaatcttccgattcgaaaggtacgaaaagggatttcagtacagct
attctggagaggaagaaggcggctaatcgattagtggttgatgaggctatcaatgatgat
aactctgtggtgtcgcttcaccctgaaactatggaaaagcttcagctttttcggggagac
actatcttgatcaagggtaagaaaagaaaggatacaatttgcattgcccttgctgatgat
acttgtgatgaacccaagattcggatgaacaaggttgttagaaacaaccttagggttagg
cttggagatgtggtttctgtccatcaatgtgctgatgtgaaatatgggaagcgagtccac
attcttccagtagacgatacaattgaaggggttaccggaaatcttttcgatgcctacctg
aaaccatacttccttgaagcataccgaccggtaaggaaaggcgacctgtttctcgtcaga
ggaggaatgagaagcgtagagttcaagattattgagaccgatccttcagaatactgtgtt
gttgcccctgatactgaaatattctgtgagggagagccagtaaaaagggaggatgaggat
cgtctggatgaggttggctatgacgatgttggcggtgttcgcaaacaaatggctcaaatc
cgtgagttggttgagctgccacttaggcacccacagctttttaaatcaattggtgtcaag
cctccaaaaggaatactactttatggacctccgggatctggaaagaccttaatagcccga
gctgtggctaacgaaactggtgctttcttcttttgcatcaatggaccggaaataatgtct
aaattggctggagaaagtgaaagcaatctaaggaaggcatttgaggaagctgagaagaat
gctccgtctatcatattcatcgatgaacttgattcaatcgcccccaagagagagaaaaca
catggagaggttgagagaaggatagtttcccaactcctgacgttgatggatggactcaaa
tctcgcgctcatgtcattgtaattggtgccacaaaccgtcccaatagcattgatgctgct
ctgaggaggttcgggagatttgatcgggaaattgacattggtgttcctgatgaagttggg
cgtcttgaagtacttcgtatccacacaaagaacatgaaacttgctgaagatgttgatttg
gaaaaaatttccaagaacacacatggctatgttggtgcagacctggctgctctatgcacc
gaggctgcacttcaatgcatcagggagaagatggacgtgattgacttggaggacgattcc
attgatgcagaaatactgaactccatggctgttactaatgaacattttgagaccgctctt
ggaacaagcaatccctcggcgctacgtgaaacagtggttgaagttcctaatgttagctgg
gaagatgttggaggccttgaaaatgtcaagcgtgagctccaagagactgttcaatatccg
gtggagcatcctgagaagtttgaaaagtttggcatgtcaccttctaagggtgttcttttt
tatggacctcctggatgtggaaagactttactggccaaggccattgccaatgaatgtcag
gccaattttatcagtgtcaagggtcccgaattgcttactatgtggtttggagagagtgag
gccaatgttcgagaaatctttgacaaggctcgtcaatctgctccttgtgtcctatttttc
gatgaattggactcaattgcaactcagagaggaagcagtgcaggagatggtggtggtgct
gctgaccgagtactgaatcaacttcttaccgaaatggatggcatgaatgccaagaaaacg
gttttcattattggcgctaccaacagaccagatataattgatcctgcgctgctacgtccc
ggtcgtcttgatcaattgatttatatccctcttcctgatgaggattcacgccaccaaatc
ttcaaagcgagcttaagaaagtcacctatttcaaaagatgtggacttaagagcccttgct
aaatacactcaagggttcagtggtgccgacatcacagaaatatgccaacgtgcatgcaaa
tatgctatcagagagaacattgaaaaggatattgaaaaagagaggagaagaagcgagaat
ccggaggccatggaggaggatgtcgaagatgaggtgcctgagataaaggcagcacatttt
gaggaatcaatgaagtatgctcggaggagtgtgagcgatgctgacattcgtaagtaccag
gcattttctcagacgttgcaacagtctagaggatttggtactgaattccggtttgctgag
aatagcagcggtgttgctgcatcggatccttttgcaccttctgctggtgcagctgatgaa
gatgatctttatagttag
DBGET
integrated database retrieval system
