KEGG   Primulina eburnea: 140840052
Entry
140840052         CDS       T11060                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pebu  Primulina eburnea
Pathway
pebu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140840052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140840052
   03041 Spliceosome [BR:pebu03041]
    140840052
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140840052
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140840052
Spliceosome [BR:pebu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140840052
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 140840052
NCBI-ProteinID: XP_073063235
LinkDB
Position
8:43343120..43346768
AA seq 547 aa
MARKRKARAVEAPQEPEPEPEPEPEPEPEPEPDPEHEPEPVRLEEAEQEQFVTEEAQQIV
EEDPGIGEGEVGDEAVEEEQEEEELDEGEGDGEGEGGEGEEGEGEGEEEKEDDAVFENNE
LESENTGKLLVDDALTNGGETEGQEEENEGELEEEPLEKLLDPFSKDQLARLIKDAVDKH
PDIMEDVNKLANADPSHRKIFVHGLGWNSNTELITSVFGKFGEIEDCKVVMDKNSGKAKG
YAFVLYKNRDGARRALLKPQKMIEGRITSCQLASAGPVQAPPPTVVATVAVPPPSEYTQR
KIYVSNVSAELDVPKLVEFFSKFGEIEEGPLGLDKETGKPRGFCLFVFKTLEGAKRALEE
PHKKFEGQILHCQKAVDGPKISKASLNFQHTQPLQQQIRPQHHHHNRHQGQLGHYHHAAK
RGKFGGGRGGMRHAGGHLMAPSGGTTAPAVGFGHAVPPAAIGQAVAALLATQGASLGIGN
LLGGIGTGVNQQGGPPMMNNAAYAGQAGASSYVGQPGMQGGYVTQQQMGQGGVRPHQGGA
PYMGHGH
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggccaggaagcgaaaagcccgagccgtcgaagctcctcaagagcctgagcctgagcct
gagccggagccggagcctgagccggagccggagccggatccggagcatgagcctgagccg
gtacgactcgaggaagcagagcaggaacaattcgttacggaggaggcccaacaaatcgta
gaggaagatccaggtatcggggaaggagaagtcggtgatgaagcagtagaagaggagcaa
gaggaagaggaattagatgagggagagggagatggagaaggagaagggggagaaggagaa
gaaggagaaggagaaggagaggaggagaaagaagacgacgctgtgtttgagaataatgag
ctagagagtgaaaatacggggaagttacttgtggatgatgccttgacgaatggaggtgaa
actgaagggcaggaggaggaaaatgaaggagagttggaggaagagccattggagaagctt
cttgaccctttttccaaggaccagctggctcgtttgatcaaggatgctgtggacaaacac
cctgacatcatggaggatgtgaacaaattggcgaacgctgacccttcacaccgcaaaata
tttgtgcacggcctcggatggaattcgaatactgagctgattacttctgtgttcggtaag
ttcggagaaatcgaggattgtaaggttgtcatggacaagaattctgggaaagccaagggt
tatgcttttgtcctctataagaaccgtgatggggcccgtcgtgctttgttgaagccacag
aagatgattgagggtcgaataacttcatgccaattggcctctgcaggtccagttcaggct
cctcccccgactgtggtggccactgtcgcggtaccacctccgtctgagtacactcagcgg
aaaatttatgtgagcaatgtatcagctgagctcgatgttccgaaactcgtggagttcttt
tccaaatttggggagattgaagaagggcctttggggttggataaagaaactggaaagcca
agagggttctgtttgtttgttttcaaaactctagagggtgccaagagggcattggaagag
ccgcacaagaagtttgaaggtcaaattctgcattgccagaaagcagtagatgggcctaaa
atttcgaaggcttctctaaactttcagcatactcaaccactacagcagcagatacggcct
cagcatcaccatcacaatcgtcaccaggggcagttggggcattaccatcatgctgcaaag
aggggcaagtttggagggggccggggaggcatgaggcacgcaggtggacacttaatggcg
cccagtggagggacaactgcgcctgcagtggggtttggccatgcagttccccctgccgcg
attggacaggctgtagctgctttgttggcaactcagggggctagcttagggattggtaat
ttgcttggagggattggaacaggtgtgaatcagcagggaggtccaccgatgatgaataac
gcagcttacgcaggtcaggctggtgctagtagctatgtaggacagcctgggatgcaagga
ggttatgttacccagcagcagatgggtcagggtggcgttaggccacatcagggtggtgct
ccctacatgggtcatggtcactag

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