Primulina eburnea: 140840755
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Entry
140840755 CDS
T11060
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pebu04131
]
140840755
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140840755
Membrane trafficking [BR:
pebu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
140840755
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140840755
Exosomal proteins of bladder cancer cells
140840755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
TPR_COPA_B
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
140840755
NCBI-ProteinID:
XP_073064027
LinkDB
All DBs
Position
1:63856646..63862058
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDHRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHECPWIVSASDDQTIRIW
NWQSRACISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHVNNVSCALFHARQDIIVSNSEDRSIRVWDATKRTGLHTFRRELDRFWILSVHP
EINLLAAGHDSGMIVFKLDRERPAFSVSGDSVFFVKDRFLRVFEYSTQTDAQLITIRRPG
SHGLNQGHRALSYSPTENAVLICSDVDGGSYELYVIPKDSYGRGDTVQEAKKGAGGSAVF
VARNRFAVLDKSSNQVLVKNLENEIVKKSILPIATDAIFYAGTGNLLCRAEDRVVLFDLQ
QRNVLGDLQTPFVRYVVWSPDMASVALLSKHSIVIADKKLVHCCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTMDVPVYITKIYGNSIFCLDREGKNRPIIIDSTEYV
FKLSLLGKKFDQVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALECGNI
EKALESAKKIDEKDHWYRLGVEALRQGNTGIVEYAYQKTKNFERLSFHYLITGNLEKLSK
MMRIAEVKNDVMGQFHDALYLGDIRERVKILENTGHLPLAYITATVHGLDDIAERIAVEH
GVNIPHLPKVRKPALLIPPNPVLCAGDWPLLMVSRGIFEGGLDDTVRGGNDDYEDAADAD
WGEGLDIDEVDKIQNGDISVLEDEDEHGENEEGGWDLEDLDLPPDADTPKTTSNSRSSVF
VAPAPGMPVSQIWVQRSSLAAEHAACGDFDTAMRLLSRQLGLRNFSPLKSLFIDLYMGSH
TYLRAFTSAPVVSVAVERGWSESTSPNVRGPPALVFNFSQLDEQLKAGYKATTAGKFSEA
LRHFLAILHTIPLIVVETRREVDEVKELIIIVKEYVLGLKMELKRRELKDNPIRQQELAA
YFTHCNLQPPHTRLALMNAMTVCYKAQNLSTAANFARRLLETNPSNENQARTARQVLQAA
EKNMKDAAQLNYDFRNPFVVCGATHVPIYRGQRDVTCPYCSAHFVPSQQGQLCTVCDISV
VGSDASGLRCSPSQTR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatagagtgaaaggcttgagtttccacagcaag
aggccatggatcttggcgagtctccacagcggcgtgatccagctctgggatcatcgcatg
ggcactctcattgacaggtttgacgagcatgaaggacccgttcgtggtgttcattttcat
aagtcacagcctctttttgtatccggaggtgacgattacaaaatcaaggtgtggaattac
aaattgcataggtgcctatttactcttctcggtcatcttgattatatccggacggttcag
tttcatcacgagtgtccttggattgtcagtgcaagcgatgatcagacaattagaatatgg
aattggcagtcccgggcttgcatttctgtgttgactgggcacaatcattatgtgatgtgt
gcatctttccacccaaaagaagacttggttgtttcagcatcattggaccagactgttcgt
gtttgggatattggtgccttgaggaagaaaacagtatctcctgccgatgatatattgcga
ttgtctcaaatgaatgcagacttctttggtggggttgatgctgttgtgaagtatgtcttg
gaaggccacgatcgaggggttaactgggcttcatttcatcccactcttcctcttattgtt
tctggagcagatgaccgacaagttaaaatctggcgcatgaacgatacgaaggcttgggag
gtggacacattaagaggccatgtgaataatgtatcctgtgctttgtttcatgcaagacag
gacatcattgtttcaaattctgaagacaggagtatcagagtttgggatgcaacaaaaaga
actggattgcatacatttcgtagggagcttgaccgattctggatcctatcagtccatcct
gagataaatctcttggctgctggtcatgatagcggcatgattgtttttaagttggataga
gagcgtcctgccttttctgttagtggtgattcagtcttctttgtcaaggaccgatttctc
cgtgtatttgagtattcaacccagacagatgctcaactgataacaattcgccgacctggt
tctcatggtttaaatcaagggcatcgagctctttcttacagtcctactgagaatgctgtt
ttgatttgctcagatgtggatgggggatcatatgagctctatgttattccaaaagacagc
tacggtagaggagacacagttcaggaggcaaagaaaggtgctggggggtcagcggtattt
gtggctcgaaataggttcgctgtgcttgacaagagcagcaatcaagtcttggttaagaac
ctggaaaatgaaatagtgaaaaagagtattcttccaattgcaactgatgctatattctat
gctggcactggaaatctactctgcagggcagaggacagggttgtcctatttgatctccaa
caaaggaatgttcttggggatcttcaaactcctttcgttaggtatgtggtttggtctccg
gatatggcttctgttgctttattgagcaaacactctattgttattgctgataaaaaactt
gtacactgctgcactcttcacgagaccattcgtgtcaagagtggagcatgggatgataat
ggagtcttcatctatacaacattgacgcatattaagtattgccttccaaatggggacagt
ggaattattaagacaatggatgtcccagtatatattacgaaaatttatgggaactctata
ttttgcttggatcgagaggggaaaaaccgtcccatcattattgattcaacagagtatgtc
ttcaaactatccttgctaggaaagaaatttgaccaagtgatgagcatgataaaaaactca
gaactatgtggacaggcaatgattgcttatctgcagcaaaagggcttcccacaggtagct
ctttattttgtgaaggatgaaaggactcgcttcaacttagcccttgaatgcggtaatatt
gagaaagcccttgaatctgcaaaaaagattgatgaaaaagatcactggtaccgactagga
gtggaggcacttcgtcagggaaatactgggattgttgaatatgcataccagaagacgaaa
aattttgagagactatcttttcattatctgataaccggtaatctggaaaaattatccaaa
atgatgagaattgccgaggtcaagaatgatgtgatgggtcaatttcatgatgcgctgtat
cttggagatattagggagcgtgttaagattctggagaatacaggccatctgcctcttgcg
tatattacagccactgtgcatgggcttgatgatattgcagagcgaatagctgtagaacat
ggggttaatattcctcatttgcccaaggtgaggaaacctgctctattgatacctccgaat
ccggtgttatgcgcaggagattggcctttgttaatggttagtagaggaattttcgagggt
ggtcttgatgatacagtcagaggtggtaacgatgattatgaagatgctgcagatgctgat
tggggtgagggtttggatattgatgaggtggacaagatacagaatggagacattagtgtg
ttggaggatgaggatgaacatggggagaatgaagagggaggatgggatctcgaggacttg
gatctgcctcctgatgctgacacaccaaagacaacttcaaattcacgttcctcggtattt
gttgcccctgcccctggcatgcccgtgagtcagatttgggtccaaagatcatcacttgct
gctgaacatgctgcttgtggggatttcgacacagcaatgcggctattgagccgtcagtta
ggattacgaaatttctcacctttgaagtcgctattcattgatctttacatgggcagccat
acgtacttgcgtgcgttcacatcagccccagtggtctcagttgcagtggaaaggggttgg
agtgagtcaacaagtcccaatgtgcggggtccccccgctctcgtgtttaatttttctcag
ttagatgaacaactcaaggccggttataaggccacgactgctggaaagttttcagaagcc
cttcgacatttcctagctattcttcacacaattccactgattgtggtcgaaacccggaga
gaggttgatgaagtcaaagagttgattatcattgtaaaagagtatgttttgggtttgaag
atggagcttaagagaagggaattgaaggacaatccaattcgtcagcaagagcttgcagcc
tatttcacccattgcaacctccaacctccacacactcgacttgcactaatgaatgccatg
acagtttgctacaaagcgcaaaatctgagcactgccgctaactttgctaggcgactccta
gaaaccaacccaagcaacgaaaaccaagccagaacagctcgacaggttttacaggctgct
gagaagaatatgaaagatgctgcacaattgaactacgattttagaaatccttttgtagtg
tgtggggccactcacgtcccgatatacagagggcagagagatgtaacatgtccttactgc
agtgcacactttgttccatctcagcaagggcagctttgtactgtttgtgacatttctgtg
gttggatctgatgcatctggcttgcgctgttctccatcacagaccagatga
DBGET
integrated database retrieval system