KEGG   Primulina eburnea: 140841738
Entry
140841738         CDS       T11060                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
pebu  Primulina eburnea
Pathway
pebu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pebu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140841738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pebu03019]
    140841738
   03036 Chromosome and associated proteins [BR:pebu03036]
    140841738
Messenger RNA biogenesis [BR:pebu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     140841738
Chromosome and associated proteins [BR:pebu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     140841738
    COMPASS/SET1 complex (yeast)
     140841738
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd VPS11_N
Other DBs
NCBI-GeneID: 140841738
NCBI-ProteinID: XP_073065489
LinkDB
Position
9:complement(32121432..32126443)
AA seq 332 aa
MAGGQSDREDNVSLELTEEILQSMEVGMAFRDYNGRISSMDFHRTSNYLVTASDDESIRL
YDVSSATCLKTINSKKYGVDLVSFTSHPTSVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSFCSQKDCFISGSLDRTVLLWDQRSEKCQGLLRVQGRPAAAYDDQGLVFAIAF
GGYIRMFDARKYEKGPFDIYSLGGDVSEANVVKFSNDGRLMLLTSSNGHIHVLDSFRGTL
LSTYNVKPVSSKSTLEASFSPEGMFVISGSGDGSVNAWSVRSGKEVASWMSTEAEPPVIK
WAPGGLMFATGSSELSFWIPDLSKLAAYVGRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgggaggccaatcggacagagaagacaatgtttcattggaactcactgaagaaatc
cttcagagcatggaagttgggatggcctttcgggattataatggtagaatcagttcaatg
gactttcataggacttcaaattatttggtaactgctagtgatgatgaatcaattcgcctg
tacgatgtctctagcgcaacttgtctgaagacaatcaacagcaaaaaatatggagttgat
ttagttagcttcacctctcatccaacttccgtgatctattcctcaaagaatggatgggat
gaatcgctgaggcttctgtcattgcatgacaacaaatacttgaggtatttcaaaggtcat
catgacagggtcgtttccctgagcttttgctctcaaaaagattgttttatatcgggatct
cttgatcgaactgttttactttgggatcaaagatcagagaaatgtcagggtcttctacgt
gttcaaggaagaccggctgcagcttatgatgaccagggacttgtatttgctattgcattt
ggaggctatataaggatgtttgatgctcgaaaatatgaaaagggcccttttgacatttat
tctctcggaggagatgtttcagaagcaaatgttgtgaagttcagtaatgatggaagactt
atgcttctgacgtcctcaaatggacatattcatgtgcttgattccttccgtggaaccctt
ttatcaacatataatgtcaagccagtttcaagtaaatctactttggaggcatctttcagc
cctgaaggaatgtttgtcatatcaggttctggtgatggtagtgttaatgcttggagtgtt
cgaagcggtaaagaagtagccagttggatgagtactgaagctgaaccaccggtaataaaa
tgggctcctggaggcttaatgtttgcaacagggtcctcagagttatcattttggattcca
gacttatctaaattagcagcttatgttggaaggaaataa

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