Primulina eburnea: 140842279
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Entry
140842279 CDS
T11060
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pebu Primulina eburnea
Pathway
pebu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140842279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pebu04121
]
140842279
Ubiquitin system [BR:
pebu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140842279
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
DUF7885
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
140842279
NCBI-ProteinID:
XP_073066144
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Position
10:1078104..1081694
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLNTDRDRNAVSLVCKSWYEIERWCRRRIFIGNCYAVEPEVVIRR
FPEVRALEMKGKPHFADFNLVPDGWGAYFYPWVAAMSVAYPLLEEIKLKRMVVTDECLEL
ISKSFKNFKVLVLSSCEGFSTDGLASVAASCRNLSELDLRESEVEDLSGHWLSHFPKNCT
SLMSLNMSCLHSEVNFSTLERLVSRSPNLKTLRLNRAVPLEKLPNLLRQCPQLVELGTGA
YSAEIRSDIFCNLREAFSACKNIKALSGFWDVVPAYLPAVYSTCSGITTLNLSYATVQSS
DLLKLVGNCRNLQRLWVLDYIEDTGLEALASSCKDLQELRVFPSDPFGGEPNVSLTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALVAIARNRPKMIRFRLCIIEPRAPDYITHEPLDTGF
GAIVENCKELRRLSLSGLLTDRVFKYIGTHAKKLEMLSIAFAGDSDLGLHHILSGCDSLR
KLEIRDCPFGDKALLANASKLETMRSLWMSSCLVSFGACKLLGQMMPKLNVEVIDERGPP
DSRPETCPVEKLYVYRTVAGRRFDMPGFVWTMNEDSESGFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactctttcccggaggaggtcctggagcacgtcttctcgttcctcaacaccgac
agagatcggaacgcggtgtcgttggtgtgcaagtcgtggtacgagatcgagcggtggtgc
cgccgccgtattttcatagggaactgctacgccgtcgagccggaggtggtgatccggagg
tttcctgaggttagagctctggagatgaaggggaagccgcatttcgcggatttcaacctc
gtgccggacggttggggtgcgtacttctatccgtgggtggcggcgatgtctgtggcctac
ccgttactggaggagatcaagctgaagcgtatggttgtgacggatgagtgtttggagctg
atttccaaatcgtttaagaatttcaaagtcttggtactctcatcgtgtgaggggttttcg
actgacggtctcgcttcggttgcagctagctgcaggaatctcagtgaacttgatttgagg
gaaagcgaagtagaggacttgagtgggcattggctcagccattttcccaaaaactgcacc
tcattgatgtctcttaacatgtcgtgcttacactctgaggtgaatttctcaaccttggag
cgtttggtttcacgttcacctaatctgaagacactacggctgaatcgtgctgtacctctt
gagaagcttcctaatctgcttcgccaatgtcctcagttggttgaattgggcactggtgcc
tattcagctgaaatacggtcggatatcttttgtaacttgagagaagctttttccgcatgt
aagaatattaaagccttgtctgggttttgggatgtggtacctgcttatcttccagctgta
tattctacctgctctggaataacaacgctgaatttaagttatgcaacagttcaaagttct
gatcttctcaagcttgtcggtaattgtcgaaatttacagcgtctatgggttctggattac
attgaagacactggccttgaagcccttgcctcatcttgcaaggatttgcaggaacttcgt
gtgttcccttcagatccttttgggggagaacctaacgtatctttgacagaacaggggctt
gtctctgtctcagagggctgcccaaagcttcaatctgttctttacttctgtcgccagatg
tcgaatgctgcattagttgctatagcaagaaatcgtcccaagatgatacgcttccgattg
tgtataattgagcctcgagctcctgattacataacccatgaacccctcgatactggtttt
ggagcaattgtggagaactgtaaggaattgcgacgcctttccctgtccggcctccttaca
gatcgagttttcaaatatattggaacccatgccaagaaattagagatgctttctatagct
tttgctggggatagtgacttgggcctccatcatatattgtcagggtgcgacagcctccga
aaactggagatccgagactgtccatttggggacaaggcacttttggccaatgcctccaag
ctggagacaatgcgatccctttggatgtcttcttgcttggtgagctttggagcgtgcaag
cttctaggtcaaatgatgccaaagctcaatgttgaagttatagatgaaagaggtccccct
gattcaagacccgaaacctgtcctgttgagaaactctacgtataccggactgttgctgga
cgaagattcgacatgcctggttttgtttggacaatgaatgaagattcagagtcggggttt
tcttga
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