Primulina eburnea: 140842400
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Entry
140842400 CDS
T11060
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140842400
03036 Chromosome and associated proteins [BR:
pebu03036
]
140842400
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140842400
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140842400
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140842400
microRNA pathway
RISC loading complex
140842400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Cyclin_D1_bind
Motif
Other DBs
NCBI-GeneID:
140842400
NCBI-ProteinID:
XP_073066365
LinkDB
All DBs
Position
10:2014901..2023291
Genome browser
AA seq
972 aa
AA seq
DB search
MSGRGRGGGGSGRGAQTYRGGGGAGGGGRGRQPSSGGGQGRGSYGPPPPSVASSSVLPFE
SVPLSPTPPVVAALSHDVEQKLAVAPPASAEVQPQPVEHDLAVENPRGQQRLTPMSSKAL
AQPARPGYGTVGQKVIVRANHFLVQVADRDLHQYDVSITPEVTSKRVCRLIMKELVNCYH
TSHLGKRMLAYDGRKSAYTAGQLPFASKDFVVKLVDEDRADRREREFKVSIKFASKADLH
HLQQFLQGRQLDIPQETLQCLDVVLRENPSNRFEVVGRSFFSPQLGQKGVLGDGLEYWKG
FYQSLRPTQMGLSLNINMSARAFFEPVLVSEYVAKYFNRNLTRPLSDQDRIKVKKNLKGV
KVELNHQQYIKRYKITGISTQPAQQLMFPVDESGEKISVVRYFRQKYNITLQYPFLPAVQ
AGSDSKPIYLPMELCKIVDGQRYSKRLNERQVSELLKATCQRPKEREKSIIEMVRCNNYN
GNKLVSEEFGIQVKPDFTSIEARVLPAPMLKYHGTGRESTIAPRVGQWNMINKKMVNGGR
VEFWTCISFSRNVDPSMFCHELISMCCNKGMEFNSEPLIHIRSANPSQMEKALVDIHTES
ASRLGGKQLQLLIVILPDISGSYGKIKRICETELGIVTQCCNPKKASRISGQYLENVSLK
INVKVGGRNTVLEQALSRGIPFLTERPTIIFGADVTHPPSGEDSSPSIAAVVASMDWPEV
TKYRGLVSAQSHREEIIQDLYTVKQDPKKGTVHGGMIRELMIAFYKSTGQKPHRIIFYRD
GVSEGQFNQVLLEEMDAIRKACVSIEERYLPRVTFVVVQKRHHTRLFAENHSDRNTTDKS
GNILPGTVVDTHICHPHEFDFYLCSHAGIQGTSRPTHYHVLYDENNFTADGLQLLTNNLC
YTYARCTRSVSIVPPAYYAHLAAFRARYYIEGTDTSDSGSTSGGVGATRERNIQVRALPL
IKDNVKDVMFYC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagagggcgaggcggcggtggcagcggaagaggagcgcagacttatcgcggc
ggaggcggcgcaggtggaggtggaagaggaaggcagccttctagtggcggcggtcaaggc
cgcggttcttatggtcctccgccgccatcggtagcatcctcgtctgttctaccttttgaa
tcagttccgctatctccgacgccgcctgtcgtggcagcgttgagccacgatgtggagcag
aagttggcggttgcgccacccgcttcggctgaagttcagcctcagccagtggagcatgat
ctggcggtagagaatccgcgagggcagcagcggttgactccgatgtcttcgaaggcgcta
gcacaaccggcgcggccaggttacgggaccgtggggcagaaggttatagtgagggccaat
cactttctggttcaagtggccgaccgcgatctgcatcaatatgacgtttcgataaccccg
gaagtaacctcaaagagagtatgtcggcttattatgaaggagcttgtcaattgttatcat
acatcccacctggggaagcgaatgttggcttatgatgggagaaaaagtgcctacacggca
gggcaactgccctttgcctctaaagactttgttgttaagcttgttgatgaagatagagca
gacaggagggaacgagagttcaaggtttccataaaatttgcctcgaaggccgatcttcat
catcttcagcaattcttacagggcagacaactcgatattccgcaagaaacattacaatgt
cttgatgtggttcttagggagaatccatccaatagatttgaggttgttgggaggtcattt
ttctctcctcagttaggtcagaaaggggtgctcggtgatggtctggaatattggaaaggt
ttttaccagagtcttcgcccgacccagatgggtctctcactcaacataaatatgtcagct
agagccttttttgaacctgttttggtttctgaatatgttgcgaagtacttcaacaggaac
ttaacaaggccattgtctgaccaagaccgcattaaggtgaaaaagaatttaaaaggagtt
aaagtggagcttaatcatcagcagtatatcaagcgatacaagataacagggatatcaact
caacctgcacaacagctgatgtttcctgttgatgagtctggagaaaagatatctgttgta
cggtactttcgtcagaagtataatatcacgcttcaatatccgtttttgcctgctgttcaa
gctggaagtgattcaaaacccatttacctccctatggagctatgcaaaattgttgatggt
caaagatactccaagagactgaatgaaagacaagtttctgagcttttgaaagctacttgt
caacgtccaaaagagagagagaaaagcattatcgagatggttcgttgtaacaactacaat
ggtaataaacttgtcagtgaggagtttggcattcaagttaaacctgattttacttccatc
gaagcacgtgttttgcctgctcccatgctgaaatatcatgggactggaagggagtccact
atagcccctagggttgggcagtggaacatgattaataagaaaatggtgaatggtggaaga
gtggagttctggacctgtatcagcttttcccgtaatgtagatccaagcatgttctgccat
gaattaatcagcatgtgttgcaacaaggggatggaatttaattcggaaccattgattcat
attcgttcagctaatcccagtcagatggagaaggctctcgttgatattcacactgaatct
gcttcgagactgggtggtaaacaacttcagttactgattgtgattttgcctgacatcagt
gggtcttatgggaagatcaagagaatttgtgagactgaattgggaatagtcacccaatgt
tgtaaccctaagaaggcatcaagaatcagtggacaatatttggagaatgtctctctaaaa
ataaatgtgaaggttggaggaaggaacactgttctcgagcaggctttgtccagaggaatt
ccttttctaactgaacgcccaactataatctttggtgctgatgttacccatcctccatca
ggagaagattccagcccttctatagccgcggtggtggcttcaatggattggccagaagtt
acgaagtatcgagggttggtttctgcgcagtcacacagggaagaaataattcaggatctt
tacacagtaaaacaagaccctaaaaaaggcacagttcatggtggaatgattagagaactt
atgattgccttctacaagtccacggggcagaagccgcacaggattatattctacagggat
ggcgttagtgagggacaatttaaccaagttcttctggaagaaatggatgcaatcagaaag
gcatgtgtttctatagaagaaaggtatctacctagagttacttttgtggtggtgcaaaag
aggcaccacactcgcctctttgctgaaaatcattctgatcgtaatacaacagacaagagt
ggcaacattctgcctggtactgtagtcgatactcatatctgtcatccccatgagtttgac
ttttacctctgtagccatgccggaatccaaggtacgagtcgtccaacgcattaccatgta
ttgtatgatgaaaacaatttcactgctgatggtctgcagttgttgactaacaacctgtgc
tacacgtatgcgaggtgcactcgatcagtctccatagttccgcctgcatactatgcccat
ttggcggcatttcgtgctcgttactacatcgaaggaactgacacatcagacagtgggtca
acctccggaggtgttggtgccacgagggagaggaatatacaggtccgggccttgccttta
attaaagataacgtgaaggatgttatgttctattgctga
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