Primulina eburnea: 140842417
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Entry
140842417 CDS
T11060
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pebu
Primulina eburnea
Pathway
pebu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140842417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pebu03019
]
140842417
03009 Ribosome biogenesis [BR:
pebu03009
]
140842417
04131 Membrane trafficking [BR:
pebu04131
]
140842417
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pebu04147
]
140842417
Messenger RNA biogenesis [BR:
pebu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140842417
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140842417
Membrane trafficking [BR:
pebu04131
]
SNARE
SNARE associated proteins
Others
140842417
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140842417
Exosome [BR:
pebu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140842417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
Viral_helicase1
nSTAND_NTPase5
ABC_tran
AAA_7
NB-ARC
NACHT
AAA_24
IstB_IS21
TsaE
DUF815
Vps4_C
ResIII
Zeta_toxin
AAA_lid_PRS2_C
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
140842417
NCBI-ProteinID:
XP_073066409
LinkDB
All DBs
Position
10:2162960..2168286
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQPESSDSKSGKKDFSTAILERKKAANRLIVDEAVNDDNSVVALHPATMEKLQIFRGD
TILIKGKKRKDTICIALADDACEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
VLPLDDTVEGLTGDLFETYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APAIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFHSALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSAGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKAKEN
PDSMDEDVVDEVSEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGVGATSGSDPFTASAGGAEEDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcaacccgagtcatccgattcaaaaagtgggaagaaggacttctcaacggcg
atcttggagaggaagaaggcagcgaatcggctaatcgttgacgaggcggtcaatgacgac
aactcagttgtggccctgcaccccgccaccatggaaaagctccagatttttcgtggggat
actattttgattaagggtaagaaaaggaaggatacaatctgcattgcccttgctgatgat
gcatgtgaagagccaaagataaggatgaacaaggtcgtacgcacaaacttgagggtccgg
cttggagatgttgtgtctgtgcaccaatgccctgatgttaaatatggaaagcgtgttcat
gtactacccttggatgatacggtagagggcctcactggagatctgtttgaaacataccta
aaaccttattttctggaagcttatcgccctgttagaaaaggcgatcattttcttgtgcga
ggggggatgagaagtgtggaatttaaagtaattgagactgatccaggtgagtattgtgtt
gtcgcccccgatactgagatcttttgcgaaggagagccggtgaaacgagaggatgaagat
aggctggatgaggttggttatgatgatgtaggtggtgttaggaagcagatggctcagatt
cgtgaattggtagagttgcctctgaggcatccccagcttttcaaatctattggcgtgaaa
ccacccaagggaattttactttatggacccccaggttctggaaagacgttaattgctagg
gctgttgccaatgaaaccggtgctttcttctttttaattaatgggccagaaattatgtcc
aaattggctggagagagtgaaagcaatctgagaaaggcatttgaggaggcagagaaaaat
gccccggctattattttcattgatgaaattgattcaatagcacctaagcgtgagaaaaca
aatggtgaagttgaaagaaggattgtttctcagctcttgactctcatggatgggctgaaa
tcccggtcccacgttattgtcatgggagcgactaatcggccaaatagcattgacccagct
ctcagaagatttggtaggtttgacagggaaatagacattggtgttccagatgaagttggt
cgacttgaagttctcaggattcataccaagaacatgaagctttctgatgatgttgacctg
gagagaattgcaaaagacactcacggctatgttggcgctgaccttgcagctctctgtact
gaagctgcacttcagtgcatcagagagaaaatggatgtcattgatctggaggatgataca
attgatgctgaaatactcaactccatggctgtaacaaatgagcacttccattctgctctt
ggaactagcaatccttctgctctaagggaaacagttgttgaggtgcccaatgtgtcctgg
gaagatataggaggcctagaaaatgtcaagagggagcttcaggagactgttcaatatcct
gttgagcatccagagaagtttgagaaatttggcatgtcaccatctaagggtgttcttttc
tatgggcctcctggatgcggcaaaactctattggcaaaggcgattgcaaatgaatgtcaa
gccaatttcatcagtataaaagggcctgaattgctgaccatgtggttcggagagagtgaa
gctaatgttcgtgaaatatttgacaaagctagacaatcagctccatgcgtccttttcttt
gatgagcttgattctatagccactcagcgaggaagtagtgctggtgatgctggaggtgca
gctgatagagtcctcaaccaacttctaacagagatggatggcatgaatgccaaaaaaact
gtttttataattggggctactaacagacctgacataattgatccagcactcttacgtcct
gggcgtcttgatcagttaatatatatccctctgccagatgaggattcacgccatcaaatc
ttcaaagcctgcctccgcaaatcaccactttccaaagatgttgatttgcgagctcttgcc
aagtatactcaaggatttagtggtgcagatatcacggaaatatgtcagcgggcgtgcaag
tatgccattagagagaacattgagaaagacatagaaagggagaggaaggcaaaagagaat
cccgattctatggatgaggatgttgttgatgaagtttcagaaatcaagcccgcacatttc
gaggagtccatgaaatatgctcgtagaagtgtgagtgacgctgatattcgtaaataccaa
gcatttgcgcagacgttgcagcagtctcgaggatttggaacagagttccgcttcgctgaa
tcaggagtcggtgcgacatctggatctgacccatttacagcctctgctggcggagccgag
gaagatgacttgtataattag
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