Primulina eburnea: 140842716
Help
Entry
140842716 CDS
T11060
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140842716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
140842716
03036 Chromosome and associated proteins [BR:
pebu03036
]
140842716
Transcription machinery [BR:
pebu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140842716
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140842716
Chromatin remodeling factors
BAF complex
140842716
PBAF complex
140842716
GBAF(ncBAF) complex
140842716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
AAA_14
Motif
Other DBs
NCBI-GeneID:
140842716
NCBI-ProteinID:
XP_073066912
LinkDB
All DBs
Position
10:5083402..5096057
Genome browser
AA seq
2208 aa
AA seq
DB search
MQSGGGPQQGSGGHGRSTAPSASASPSSSSSAAFDHQQQQQQRQALQQQFLRRTEGNNAL
LAYQAGNIHGALAGANVMASGSMQFPQQSRKQIDLGQQHTPPNIQDQGHNRIQGAEQQML
NPFQHAYLQHAFQAAQHKSTLGMQSQQQIKPGISGPLVKDQDMRMTNMIQVGNPSQASNS
KKSSEQVVHGEKPADHNQRPISSEPRSSYPARLGQTMSSASMLGPQTQQNIMNMTNNPMA
MAAQMQALQSLALEHNIDLSNPANANVIAQLIPLMQSRMVAQQKVNEGNINIQSASFPKP
NSTSMQVARESSPHANSSSDVSGQSGSSKVRQVLPSSIGVTSSAALVENSSNLSLQQFTA
HVKDNQLTPRQPNITGSGMPPSHPMQSPGNSSQGVESLMLAKASSISEASQSQYARKANQ
SPQQSVTPSGDGEVGNLSTPAGGPFPQIRQSHVGFTKQQLHVLKAQILAFRRLKKGDSTL
PRELLQAISPPTLDLKIPQVFPPPGTASKDRSTGECVDEHAKSMESTEKMPQVVTLAAGA
GKVKEEVFRDGKATSLAANMQSTTSETKGSRFVVPHGKEEYQNEGSSGKLEHGTDPGMQI
PPIRSDVTADRGKAVASQPVVSETIQVKKPVQASNTTQSKDTGSTRKYHGPLFDFPVFTR
KHDTLGPSMINNNNNLFLAYDIKDLFSEEGGEIWKSRRAEKIGKIEKLLALNFERKKFKP
DLVIRLQIESKKLQLVDLQTRLRDEIKQQQIEIMAMPDRPYRKFVRLCERQRQELNRQSQ
ASQKAVREKQLKSIFQWRKKLLEAHWIIRDARIARNRGVHKYHEKMLREFSKRKDDGRDK
RMEALKNNDVERYREMLLEQQTNINGEAAERYAVLSSFLTQTEEYLHKLGSKITAAKNLQ
EVEESGNSAAAAARAQGLSEEEVRAAAACAREEVLVRNRFTEMNTPKENTSVNKYYNLAH
AVNERVNRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYL
MEFKGNYGPHLIIVPNAVLVNWKSEFHNWLPTVSCIFYVGGKEQRAKLFSQEVLALKFNV
LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN
DLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNAEDDWLETEKKVIVIHRLHQI
LEPFMLRRRVEDVEGSLPPKVSIVLKCRMSSIQSVIYDWIKSTGTLRVDPEDEKLKVQKN
PNYQPKVYKTLNNRCMELRKSCNHPLLNYPYFSDFSKDFLVRSCGKLWVLDRVLIKLHRT
GHRVLLFSTMTKLLDIMEEYLQWRRLVFRRIDGTTSLEDRESAIMDFNRPDTDCFIFLLS
IRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVGKISSCQ
KEDEIRSGGAVDSDDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEE
RRLTLETLLHDEERYQDTVHDVPSLHEVNRMIARSEAEVGLFDQMDEELDWAADMTQYDQ
VPKWLRASTKEVNTAIANLSKKSSKNVFYGGSTGLDSSDVVHETERKRGRPKRKVPIYTE
LDDEEEFSEASSEDRNGYSVQEVGEIGDFEDDESTGVPRLNNEQSEEDSPVSADGYQPQR
ALESIRNNHILDEAGSSGSSSHSQRLLRMVSPSVSSQKFGSLSALDDRSNSRSKKSVDEL
EEGEIAASGDSHIDHQQSGSWIQDRDEGEDEQVLQPKIKRKRSIRYRPRPADRLGEKYIK
KSSLRHVDHAQLQFQVERKYAFQARGEHSHNVGEPNSLKSDKNDLSIKNRRSLPSRKISN
IAKLHGSMKSGAEQPRDYIAEQPRENWDNKVMKRSTGSGHKMSAVIQRKCKNVISKLQRR
IDKEGHQIIPLLTELWKRIENSNPVGGGAGNNLLDFRRIDLRVDKSEYSGVMELVSDVQL
VLKCGLQYYGFSYEVRSEAKKVHDLFFDILKIAFPDTDFREAKNSMSFSGPVSTPASASR
QMLASQAKRQKLVKDVDSDNSHFQKPQTRAANLPVEDTKTRSYMTQKELRLGSSSSRELS
QQDNAHPFTHPGDFVICKKKRKDREKSAVKAGNRLAGPLSPTGLGLNIRSPSSFSGNKDM
GLMQQIGAQQSRAALSPQQGNSGGSAVGWANPVKRMRTDAGKRRPSHL
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggcggtgggccccagcaaggcagcggcggacatggtcggagcactgcccct
tcggcatctgcttcgccatcctcgtcttcatctgcggcatttgatcaccagcaacagcag
cagcaaagacaggcattgcagcaacaatttctgaggaggaccgaagggaataatgctctt
ttagcctaccaagctggcaatattcatggggcccttgctggagcaaatgttatggcatcc
ggatccatgcaatttcctcagcaatccaggaagcaaattgatctgggtcaacagcatacc
cctcctaatattcaagaccagggtcacaataggattcaaggtgctgaacaacagatgttg
aatccttttcaacatgcttacttgcaacatgcttttcaggctgcacaacataaatcaacc
ttagggatgcaatcccagcagcagataaaaccagggatatctggtcctcttgttaaagat
caagatatgcggatgacaaatatgatccaagttgggaatccgtctcaggcatccaactcc
aaaaaatcatctgagcaggtcgttcatggtgagaaaccggcggatcataatcagcggccc
atatcaagcgaaccaagatctagttatcctgcacgtcttggtcaaacaatgtcatcagcg
tcaatgctggggcctcagacccagcaaaatatcatgaacatgaccaacaatcccatggct
atggctgcacaaatgcaggccttgcaatctttggcactcgagcacaatattgacctgtct
aatcctgcaaatgcaaatgttatcgctcaactaattccactaatgcaatccagaatggtt
gctcaacaaaaagtgaatgaaggcaatatcaatatacagtctgcatcttttccaaaacct
aacagtacctcgatgcaggttgcgcgtgaaagttcaccccatgctaattcctcaagtgat
gtatctgggcagtctggatcttcaaaagttaggcaggttttgcctagtagtataggtgtg
acttctagtgctgctctggttgaaaattctagcaacctatctctgcagcagttcactgcg
catgttaaagataaccaactgacccctagacaaccaaatattactggaagtggaatgccc
ccttcgcatcccatgcaatcacctgggaattcaagccaaggagttgaaagtttaatgctt
gcaaaagcttcatccatttcagaagcttctcagtcccagtatgccagaaaagctaatcaa
tctccccaacaatctgtaactccatctggtgatggggaggtgggtaatttgtcaacacct
gctggtggaccatttccccagatacgacaatcacatgttggctttacaaagcagcaactg
cacgtacttaaagcacaaatacttgcatttaggcgtctaaagaaaggagattcaactctg
ccacgtgaattgctccaagctatttcccctccaacacttgatttaaagataccacaggta
tttccccctcctgggactgctagtaaggataggtcaactggagagtgtgtagatgagcat
gcaaagtctatggagtcaactgaaaaaatgcctcaggtggtgactttggccgctggagca
ggtaaagtgaaggaggaagtttttagagatggcaaggcaacttctttggctgctaatatg
caaagcactacgtctgaaacaaagggatcaagatttgtggttcctcatgggaaagaagag
tatcagaatgaaggatcttctggtaaactggaacatgggactgatccaggaatgcagata
cctcctattaggagtgatgttactgcagataggggtaaagcagttgcttcgcagccagtt
gtttcagaaacaattcaagttaagaaacctgttcaagcaagcaacacaactcaatctaag
gatacaggttcaactagaaagtatcacgggcctttgtttgatttcccagtgtttactagg
aaacacgacacacttgggccatctatgattaacaataacaataacctgtttctggcttat
gatattaaagatcttttctccgaggaaggtggagagatttggaaaagcagaagggcagaa
aaaataggaaagattgaaaaattactagctctaaactttgagaggaagaagtttaaacct
gatcttgtcatacgactacaaattgaatcaaaaaaacttcagcttgtagatcttcagaca
cggttgagggatgagattaagcaacaacaaatagagataatggcgatgcctgatagacca
tatcggaaatttgttagactttgtgagcgtcaacggcaagagctgaacaggcaatctcag
gctagtcagaaggcagttagagagaagcaactgaaatccatatttcagtggcgcaagaag
cttcttgaggcccactggatcatccgtgatgctcgaattgctcgcaatagaggagttcac
aagtatcatgaaaaaatgctacgggagttttctaagaggaaagatgatggccgtgataaa
aggatggaagcactgaaaaataatgacgtggaaagatatcgggagatgttgttggaacaa
caaactaacattaacggcgaggctgcagaaagatatgctgttttgtcgtcatttctgact
cagactgaagagtatcttcacaaattaggaagtaaaattacagcggctaaaaatcttcag
gaggttgaggagtcaggcaattctgccgctgccgctgcacgtgcacagggtctctctgaa
gaagaagtaagagctgctgctgcctgtgctagagaagaagtgttggtaagaaatcgattt
accgagatgaatacaccaaaagaaaatacatccgttaacaagtattacaatcttgcgcat
gctgtgaatgaaagggtcaataggcagccctcaatgttacgtgctggaacattacgtgac
tatcagcttgtcggtttgcagtggatgttatctttatacaacaacaaattaaatggaatc
ttggctgatgagatgggtcttgggaagactgttcaggtcatgtccttgattgcatattta
atggagtttaaaggaaactatggtccacatctaatcattgttcctaatgctgttctggtg
aactggaagagtgaattccacaattggcttccaactgtctcctgcatattttatgttgga
ggaaaagagcaaagggcaaaattgttttctcaagaagtcctagccttgaagtttaacgtc
ctcgtgacaacctatgagttcattatgtatgatcggtcaaaactttcaaaagttgattgg
aagtatattataattgatgaagcacaacgaatgaaggacagagagtcagtgctagctcgt
gatcttgatagatatcgctgccaaaggcgcttgcttctcactggaacaccgttgcagaat
gatcttaaagaactatggtcccttttaaacctattgctcccagaagtatttgataataga
aaagcttttcatgattggttttcacaaccatttcaaaaagaaggtcccacacacaatgct
gaggatgactggcttgagactgagaagaaggtgatagttatccatagacttcatcaaatt
ttagagccatttatgcttaggcgtcgtgttgaagatgtggaaggatcactgcctcccaag
gtttcgattgtcctgaaatgcagaatgtcttccattcagagtgtcatatatgactggatc
aaatctactggtactcttagagttgacccagaagatgaaaagctcaaggttcagaagaat
ccaaattatcagccaaaagtttacaaaaccttaaataacagatgcatggagctaaggaaa
tcatgcaatcatcctttgctcaactatccatatttttctgatttttcgaaggattttctt
gtgagatcatgcgggaaattgtgggttctggatagagtgttaattaagcttcatcgaact
ggacacagggtactgctatttagcaccatgactaaactgctcgacataatggaggaatac
ttgcaatggagaaggcttgttttcagacgaatcgatgggacaactagtttggaagatcgt
gagagtgctattatggacttcaacagacctgatactgattgttttatattcttgctcagc
attcgtgctgctggacgaggtttgaatcttcaatctgctgacactgtcatcatatatgat
cctgatccaaacccaaaaaatgaggaacaggctgtcgctcgagcacaccgaatagggcag
actagggaggtaaaagtcatttatatggaagctgtggttggcaaaatatcaagctgtcag
aaagaagatgagatcaggagtggaggtgcagttgattcggatgatgaccttgctgggaag
gatcggtatatgggttccattgagagcctcattcggaataacatccaacaatataagatt
gacatggctgatgaagttataaatgctggtcgttttgaccaaaggacaacacatgaagag
agacgcctgaccttagaaaccttgttgcatgatgaagagagataccaagacactgtacat
gatgttccttctcttcatgaagttaaccggatgattgccagatcagaagcagaagtaggg
ctctttgatcaaatggatgaggaacttgactgggcggcagatatgacacagtatgatcaa
gttccaaagtggcttcgtgcaagcactaaagaggtaaataccgcaattgctaatttatcc
aagaagtcatcaaagaatgtcttctatggaggaagtacaggcttagattccagtgacgtg
gttcatgagaccgagagaaagagggggcgtcccaagaggaaagttcctatttacactgaa
ttggatgacgaagaagaattttctgaagctagttcggaggataggaatggatattctgta
caagaagtaggagaaattggggattttgaagatgatgagtctactggggttccacgactt
aataacgagcagtcagaagaagatagtcctgtttctgctgatggataccaaccccaaaga
gctttggaaagcatcagaaacaaccacatacttgatgaagcaggttcatctggatcttct
tcacacagtcaaaggttattaaggatggtttctccgtctgtgtcttctcagaaatttgga
tcactttctgccttagatgacaggtccaactcccgttcgaagaaatcggtagatgaatta
gaagaaggggaaattgctgcatctggtgattctcatattgaccaccagcaatctggtagc
tggatacaagatcgtgatgaaggtgaagatgaacaggtcttgcagcccaaaattaaacga
aagcgaagtattcggtatcgtccaaggcctgcagatagattaggagagaaatatattaag
aagtcatcccttcgccatgtggatcatgctcaattgcaatttcaggtggaacgtaaatat
gcatttcaggcaagaggcgaacattcacataatgttggagaacctaattcattgaaaagt
gacaaaaatgatttatccatcaagaacaggcgtagtttaccctcgaggaaaatatctaat
atagctaaattgcatggttctatgaaatctggtgcggaacagccaagggattatattgca
gaacagccaagggaaaactgggacaataaagttatgaaaaggtctactggtagcggacat
aaaatgtccgcggtcatccagagaaagtgcaagaatgtcatcagtaagctccagagaaga
atagataaagaaggtcatcaaattatacccttgctaactgaactttggaaaagaattgag
aattccaatcctgtgggtggtggggcagggaataaccttttggacttcagaaggatcgat
cttcgtgtagacaaatctgagtacagtggtgtcatggagcttgtatctgatgtgcaactt
gtgttgaagtgtggtttgcagtattatggattctcttatgaggtgaggtcagaagcgaag
aaagtacatgatctcttctttgatatcttgaagatagcatttccagacaccgattttcga
gaagccaaaaattctatgtctttttctggtccagtttctacaccagccagtgcttcaaga
cagatgcttgctagtcaggccaagcgccagaaattagtgaaagatgtggattctgataat
agtcattttcaaaagccacagactcgagctgccaaccttcctgtggaggacaccaagact
aggagttatatgacacaaaaggagcttcggcttggaagtagcagtagccgtgagcttagc
caacaggataatgcacacccatttactcatcctggggactttgttatctgcaaaaagaag
aggaaagacagggaaaaatcagcagtgaaggcagggaataggttagcaggtcctctgtca
cctactggccttggccttaatattagaagtccaagctcgttttctggcaacaaagatatg
ggattgatgcagcaaattggtgcacaacaaagtcgggctgccctttctcctcaacaaggg
aatagtggtggtagtgctgttggttgggcgaatcctgtaaagagaatgagaacggatgct
ggaaagaggcgcccaagccatttatga
DBGET
integrated database retrieval system