Primulina eburnea: 140842722
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Entry
140842722 CDS
T11060
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pebu03009
]
140842722
Enzymes [BR:
pebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140842722
Ribosome biogenesis [BR:
pebu03009
]
Eukaryotic type
90S particles
Helicases
140842722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140842722
NCBI-ProteinID:
XP_073066923
LinkDB
All DBs
Position
10:5142984..5159163
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AA seq
1289 aa
AA seq
DB search
MLPGKKKKEKRVKKQVPNRLMNKPKELRKSHKRKLKKLKEDKEKETLLEKSIDTLERYKI
RDDVYSIMCSSRNLGQVETALEKRRRKANFLKAGLELAESDRPLKKRTSDDPSFHVEQHE
NILMPQPINDLSNFKPSTAEKEVMHDATVSPKKMVNETMEPSRTELSKKLVPSSCSYEEI
MKLELKPVDTLHRDPKNSLAGPSNQDNCYFVRSLCTPTVVHVSRPKEVEMTRRDLPIVMM
EQEIMEAINDHNSVIICGETGCGKSTQVPQFLYEAGFGPNHAHTRRGIIGVTQPRRVAVL
ATAKRVAFELGLRLGKEVGFQVRHDRRIGDNCSIKFMTDGILLREVQNDFLLKCYSVIIL
DEAHERSLNTDILIGMLSRVIKERQREFEEQHKRIISGETIEFENRIYPLKLVLMSATLR
VEDFVSGRRLFHDPPPIIEVPTRQYPVTIHFSKRTEIVNYIGQAFIKVMSIHKKLPPGGI
LVFVTGLREVEYLCRKLRRSNKTFSLNEEKPSEEIDMKEITDAFDCQVDFGDETPDHFSF
HMEENHGNLLEDEYDKTYNSSEESDLEFYSDDESYSKSKSAESDGKLVDILGVHGGIDSL
KAAFEALARKNGPLPDNTTQNVTKTLEGGPNQSSSIAEKSVEDKVFCTGALRVLPLYAML
PAPAQLRVFEEVKEEERLVVVATNVAETSLTIPGIRYVVDTGREKVKIYNSSNGMESYEI
QWISKASAAQRAGRSGRTGPGHCYRLYSSAVFNNMFPDFSSAEILKVPVDGVVLLMKSMH
IGKVANFPFPTPPETNALVEAENCLKVLEALDSNGRLTPLGRAMSLYPMNPRHSRMLLTV
IQTMQKVKDSSRASIVLGYAVATAAALSSSNPFIMQFEGSHIDTNDSKHAEKDGSVESEN
IRDKGEKGRRKKLKEIAKHSREKFCNPTSDALTIACALQCFEISENPVEFCSEGALHYKT
MEEMSKLRRQVLQLVFSSSTSDLQRDFLWTHCTLKDVECSWKIPSNKHHLLLNEEDILAQ
AICAGWADRVARRIKAASVVLDGERKVKSVRYQACMVKETVFLHRWSSVSKSPPEFLVYN
DLLYSKRPFIHGATSVRSNWLLKYAQPLCSFSAPLSDPKPCYDPINDQVLSWVTPTFGPH
LWQLPLHGLPIKDNFNRVVVFACSLLEGQVLPCLKAARKYLAVPPSSILKPEALGLKRVG
NLLSKMSLRGRVIDSCTKLRNLWNENPAELFPEIRDLFQEGFHMQFEELWVEMLHQINLD
QEERFPVRAKGEKRKKLDFQVIKPIFVYP
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaggaaagaaaaagaaagaaaagagggtgaaaaagcaggtacccaaccgcttg
atgaataagcctaaggagctaaggaaatcccataaaagaaagttaaagaagctcaaggag
gacaaagagaaggaaacgcttctggagaaaagcatcgatactttagagaggtacaagatt
cgagatgatgtttattccattatgtgctcttcaaggaatttgggtcaggttgaaacagct
cttgaaaagcgtaggaggaaagccaactttttgaaagcaggtttagaattggcggagagt
gatcgaccattaaagaagaggaccagtgatgatccatcttttcatgtggaacaacatgag
aatattttaatgccacaaccaatcaacgacctgagcaatttcaagccgtcaacagcagaa
aaggaggtgatgcatgatgctactgtttcacccaagaaaatggttaacgagactatggaa
ccatctaggacagaactttcaaaaaaacttgttccttcaagttgcagctatgaagaaatt
atgaagcttgagttaaagcctgtggatacactgcacagggatccaaaaaacagtcttgct
ggtccaagtaatcaagacaactgttattttgtaagaagtctctgtactccaactgtggtg
catgtgtcaaggccaaaggaggtggaaatgacaagaagggatcttcctattgtcatgatg
gaacaagaaataatggaagctattaatgatcacaatagcgttattatatgtggtgagact
ggttgtggtaagagcacccaagttcctcagtttctttatgaggctggttttggcccaaac
catgcgcatactcgtcggggaattattggcgtcacccaacctcgccgagttgcagttctt
gcaactgctaagcgtgtggcttttgagcttggtcttcgtttgggtaaggaagtaggtttt
caagttagacatgacagaaggattggagataattgctcaatcaagttcatgacagatgga
atcttgcttcgagaagtgcagaatgattttctattgaagtgctactctgttataattttg
gatgaggcacatgagagaagtttgaatacagatatactcatcgggatgctttctcgagtt
atcaaagagcgtcaaagggaattcgaggagcaacataagagaataatttcaggggaaact
attgaatttgaaaataggatatatccgttgaaacttgttctaatgagtgcaacactgcgg
gtagaagattttgtgtctgggagaagactttttcatgaccccccgcctattattgaagtt
ccaactcgacagtatccagtcaccatacatttctcgaagagaacagagattgtaaattat
attggtcaagcttttataaaagttatgtcaattcacaagaaactaccacctggtggcatt
cttgtttttgtgacaggactaagagaagtagaatacctttgtaggaagttacgtaggtct
aacaagacattttctttaaatgaagagaaaccttctgaagaaattgatatgaaagagatc
actgatgcatttgattgtcaagtagattttggtgatgagactcctgatcattttagcttt
cacatggaggagaatcatggcaacttattggaagatgaatatgataaaacctataattca
agtgaagagagtgatctggaattttatagcgatgatgagagttattcaaaatcgaagtct
gctgaatctgatggtaagcttgtggatattttgggagtgcacggaggcattgattctttg
aaggctgcttttgaagccttggccaggaaaaatggtcctttaccggacaatacaacccaa
aatgttaccaaaacacttgaaggaggcccgaaccaatctagttccattgctgagaaaagt
gtggaggacaaggttttttgtactggtgcacttcgggttctgcccctttatgccatgctt
cctgcaccagcccagcttcgtgtatttgaagaggtaaaggaagaagaacgtcttgttgtt
gttgcaactaatgtggctgagacctctttgaccattcctggaataaggtatgttgttgac
actggaagggagaaggtcaaaatatacaactcttccaatggtatggaaagttatgagata
cagtggataagtaaggcttctgcagctcagcgtgctgggagatctggaagaaccggacct
ggacactgttatcgcctatattcttctgcagtcttcaacaatatgtttccggacttctca
agtgctgaaatattaaaagttccggttgatggtgttgtcctccttatgaaatccatgcat
attggcaaagtggctaattttcctttccctacacctcctgagaccaatgctttggttgaa
gcagagaattgtttgaaggttcttgaggcactagattcgaatggaagattgacccctcta
gggagagctatgtctctctatcctatgaatcctcgtcattccagaatgctcctcactgtt
attcaaactatgcaaaaggtgaaagatagtagtcgagcaagtatagttttgggctatgca
gttgcaacagctgcggcgttgagctcgtcaaatcctttcatcatgcagtttgaaggaagc
catattgatacaaatgattcaaagcatgccgagaaagatggttctgtagaaagtgagaac
atccgtgacaaaggagagaagggaaggagaaagaaattgaaagaaatcgccaaacattct
cgtgaaaagttttgtaacccaactagcgatgctttgaccattgcctgtgcacttcagtgt
tttgaaatttctgaaaatccggttgagttctgcagtgagggtgctttacactataaaacc
atggaagaaatgtccaagctgagaagacaggttcttcaactagttttcagctcaagtacg
agtgatctgcagcgagactttttgtggactcattgtactctcaaggacgtggaatgttct
tggaaaattccctcaaataaacatcatcttttgctaaatgaggaggacatcttggctcag
gctatttgtgccggttgggctgatagggttgctaggcgcattaaagcagcttctgttgtg
ttagatggagagagaaaagttaaatcagtaaggtatcaagcttgcatggtcaaagaaaca
gttttcctccatcgttggtcatctgtttctaaatctccccctgaatttttggtttacaat
gatttactgtatagtaaacgaccatttattcacggtgccacaagcgtgaggtcaaattgg
cttcttaagtatgcccagccactgtgtagtttctctgcacccctttctgatccaaaacca
tgttatgacccgataaacgatcaggtcttatcttgggtgactcctacgtttggtccccat
ctgtggcagcttcctctgcatggtttacccatcaaagacaattttaatcgagtggtggtg
tttgcttgttctttactcgaagggcaagttttgccatgcctgaaggctgcccgtaaatac
ttagctgtcccaccttcaagcattttgaaaccagaagcattgggccttaaacgggtggga
aatttgttaagcaaaatgagtttgagaggaagagtcatcgacagttgtactaaattaaga
aatttgtggaatgaaaatccagcagagttgtttcctgaaattagagatttatttcaggaa
ggattccatatgcagtttgaagaactctgggttgagatgctccatcagatcaacttagat
caggaagaaagattccctgttagagccaagggggagaaaaggaagaaattggactttcag
gtaataaaaccgatatttgtatatccatga
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