Primulina eburnea: 140842803
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Entry
140842803 CDS
T11060
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pebu Primulina eburnea
Pathway
pebu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140842803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140842803
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
140842803
SWR1 complex
140842803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Motif
Other DBs
NCBI-GeneID:
140842803
NCBI-ProteinID:
XP_073067062
LinkDB
All DBs
Position
10:complement(6045240..6061271)
Genome browser
AA seq
2039 aa
AA seq
DB search
MASKGPRSKLDHESRARRQKVLEAPKEPKRPKTHWDHVLEEMIWLSKDFESERKWKLAQA
KKVAMRASKGMLDQATRGEKRVKEEEQRLRKVALNISKDVKKFWMKIEKLVAYKHQLELD
VKKKKARDKQLEFLLGQTERYSTMLAENLVNSPTPCKPSHLYTVQEKPNIPRKGDDFDRT
KSESDAGSQSNAPGLDEDYDILSEDESVDDEHTIDEDEALITNEEREEELAALRSEIDLP
LEEILKRYVAQEASQDKSPGKIDNAPGTTDISNHDSKEDMECDAELEGTGSPARHGCRCV
KSNGVLSLSENHYSEVETYKRRNSSKKLLEFEKMLLLQNFNDEHEDDDFILSSGEEKEND
MDDETTLLEEEELADAESDHTVDEVALLQKESEVPVEELIARYKKGCDSGEDARVDSDED
AGLDSGEDVGVDSESSHASGSEEFLDSSAHGCSELKQPGDESTGLEREIRPHLQDDEAEL
LGKSGEDIQSEDIIADAAAAARSAQPTGNTFSTTKVRTKFPFLIKYPLREYQHIGLDWLV
TMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWC
PAFKILTYFGSAKERRIKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHL
IKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNP
ISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHVINCRLSRRQRNLYE
DFIASSETQATLSSANFFGMISIIMQLRKVCNHPDLFESRPIISSFDMSGIDMQLSSSVC
SMLAPVALSHVDLQGLGFVFTHLDFIMTSWEGEEIQAIATPSSLIERRANILEGTPSLAN
HKKKLNATNIFVEIQKALLNERLRELNERAAAVAWWNALRCKKKPMYATDLRELVTVKHP
VHDIHSQKYNPPSYVYSSKVVDIVLSPAERFAKMVDQIESFMFAIPAARAPPPVCWCSNG
RSSVFINQNYKDKCSEALFPLLNPFRPAIIRRQVYFPDRRLIQFDCGKLQELAVLLRKLK
SEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNAKFFLFIL
STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENI
LKKANQKRALDSLVIQGGSYNTEFFKKLDPMELFSGNRTIPIEDAHTDKTVNNGGEINLS
SADLEAALKNAEDEADYMALKKVEEEEAVDNQEFTEEAIGKLEDDELVNEEDIKPDDTAE
HGGFKTKSDEGFISRSHPLEVNPLVLTGEEDDVDMLGDVKQMAAAAAAAGQTILSFEDQL
RPIDQYAVRFLELWDPIIDKAAVESHVQIAEAEWELEHIEKLKDDMEAEIDDDEEPLVYE
RWDSDFATEVYRQQVEALAQHQLMEDLEREAKEKDALEYRNSDYIRNDVSSAPKPKSKKR
NKKAKFKSLKKGALVSKSVSVKTESSTEPMSIDDSMYDEMITSSDALSPSSTREKKRKPA
LDDDDLMSKKKSKKEDILHSKSSSKYYNSHKELKILDNGFVDLESKQLSRGKIQGKLSIS
VMPLKRVFTIKPEKLKKKGNIWSKDFPSPDLWSTREDAVLCAVVHEYGPNWNLACDILYG
MTAGGFYRGRIRHPVHCCERFRELIQRYVLSGGDATNTDKAVNNVSGKGLLKVTEDNIRV
LLSITSELPDHEPLLQKHYFAALSAAWRLSRPSLRKSSLSAQNGFYSSSQFGDSVNHQNS
LRKSSEMLEFTNLYQCGVLVAAALDGDSSYHTDEVSSIVNQSNEVLVAKERLDITLALQG
ERDEITPLPSTADLSILGPDPPPSLKMHASEDGNFKSSWSLVENQFRIPRPQCVEGLFGE
ELLGFPIGRQKLLVSESVKPSKSKLKRTGIESADLNCLTASQVFQPLPLTVSDSSPNFDE
FSSFFHDGGVECDNEYLLGTDNEIASLGSTLGIDSLEIWPDLTSELDDWSLLPEFTDIG
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtccaaggtctaaacttgaccatgaatcgcgggctcggcgacagaag
gtgcttgaagccccaaaagaaccaaaacgccctaaaactcattgggatcatgtcttggaa
gagatgatctggttatctaaggacttcgagtcagagaggaaatggaaacttgctcaggcg
aagaaagttgcaatgagagccagcaagggcatgctggatcaagccacaagaggggagaag
agagtgaaggaagaggaacaaaggttaagaaaagtagcgctgaatatttcgaaggacgta
aagaaattctggatgaaaattgagaagctggtggcgtacaagcatcagctagagctagat
gtgaagaagaaaaaagcacgtgataagcagcttgagtttcttctagggcaaacagaaagg
tactcgacgatgctagcagaaaaccttgtgaactcgccaactccttgcaaaccatctcac
ctttataccgttcaagagaaaccaaatattccacggaaaggagatgatttcgatagaaca
aaatctgaatcagatgctggatcccagtcaaatgcccccggtttggacgaggactatgac
atactttctgaagatgaatcagtagatgatgaacatactattgacgaagacgaagctctg
ataaccaatgaagagagggaagaagagctggcagctttgcgaagtgaaattgatctgcct
cttgaagagatactcaaacgttatgttgctcaagaagctagccaagacaagagtcctggc
aagattgataatgcacctggaacaactgatataagtaatcatgacagtaaagaagatatg
gaatgtgacgctgagttagagggaaccggctcaccagcgaggcatggttgtcgttgtgtt
aaaagtaacggtgtcttgtctttgtccgaaaaccattactcagaggttgagacatacaag
aggagaaattcttcgaagaaactcctcgagtttgaaaaaatgttgcttttgcagaatttc
aatgatgaacatgaagatgatgattttatactttcatccggagaagaaaaggagaatgac
atggatgacgaaacaaccctcttggaggaggaagaattagcagatgccgaatcagaccat
actgttgacgaggttgcacttctgcagaaggaaagcgaagttcctgtggaggagctgatt
gcaaggtataaaaagggttgtgactctggtgaagatgcgcgagttgactctgatgaagat
gcgggacttgactctggtgaagatgtgggggttgactctgagtcctcacatgcttctggt
tctgaggagtttctggattcatcagcacatggatgctctgaacttaagcaacctggtgat
gaatctactggcttggagcgtgagatacgccctcatctgcaagatgatgaggctgaactt
ctgggaaaatctggagaagatattcaaagtgaagatatcattgcagatgcagcagctgca
gccaggtcagcacaaccgacgggtaacacattctcgacaacaaaagtgcgtacaaagttt
cctttccttatcaagtatccgttgcgggagtatcaacatattggcttggattggcttgtg
accatgtatgaaaagagattgaatggaattcttgccgatgagatgggtttggggaagaca
attatgacaatagcattgcttgctcacttagcttgtgaaaaaggaatatggggtccacat
cttattgttgtcccaactagtgttatgctcaattgggaaacagagtttcttaaatggtgt
ccagctttcaaaatattgacgtactttggaagtgctaaagagcggagaattaagagacaa
ggatggatgaagcctaattattttcatgtttgcataactacttacaggcttgtcatacag
gactctaaagttttcaagaggaagaaatggaagtaccttattctggatgaagctcatttg
ataaagaattggaagtcacaaaggtggcaaacacttcttaattttaactcaaaaaggcgt
attcttctaacaggtacaccattgcagaatgatctaatggaactctggtctcttatgcat
ttcttgatgccacatatttttcaatctcaccaagaatttaaggactggttcagtaatcct
atatctgggatggtagagggacaagagaaggtaaataaagaagtagtagatcggctgcat
aatgttctccgtccttttattcttcgtcgattgaaaagggatgttgagaagcagcttcca
atgaaacatgaacatgttattaattgtagactttcacgaagacagcgtaatttatacgag
gatttcatagctagctctgagacgcaagcaactctatctagtgctaatttctttggaatg
ataagtattattatgcaacttcgtaaagtctgcaatcatcctgatttgtttgaaagccgt
cccatcattagttcatttgatatgagtggtattgatatgcaactgagttcttctgtttgc
tcaatgctcgcgcctgtcgctttgtcacatgttgatctccaaggcttgggttttgtcttt
acacatttggatttcatcatgacttcttgggagggtgaagaaattcaagctattgctact
ccttcaagtttaattgagcgtcgtgcaaacattttggaaggaactccaagcttagctaac
cataagaaaaagctaaatgcaacaaatattttcgtggagatccaaaaggcactcttgaat
gaaagattgagagaactgaatgagagagcagcagctgtagcatggtggaatgctttgagg
tgtaagaaaaaaccaatgtatgccactgacttacgagagcttgttactgtgaagcaccca
gtccatgatatccatagtcagaagtacaatcctccgtcttatgtatattcatccaaagtg
gttgacattgtgctttcaccagctgaaagatttgcaaagatggttgatcaaattgaaagt
ttcatgtttgcaatacctgctgcacgtgcccctcccccagtttgctggtgcagtaatggt
agatcatctgtgtttataaaccaaaattacaaggataaatgttccgaagctcttttcccg
ctactgaacccatttcgacctgctataattcggaggcaagtctattttccagataggaga
cttattcagttcgactgtggtaagctgcaggagcttgcagtgctccttagaaaattgaaa
tcggagggccaccgtgcgctgatattcacccaaatgacaaagatgcttgacattttggag
gccttcattaacttgtatggctatacttatatgcgtcttgatggctctactccgcctgaa
gagaggcaaacacttatgcagcggtttaacacaaacgcaaaattttttcttttcattttg
tcaacacgcagtggtggagttggcattaatctagttggggcagatactgttatcttttat
gatagtgattggaatccagccatggatcaacaagcccaagatagatgtcacaggataggg
cagacacgtgaagtccacatctataggctaatcagcgagagcaccattgaagagaacatt
ctgaagaaggctaatcagaagcgtgctcttgacagtttggttatacaaggtggaagctat
aacactgaatttttcaagaaactagatccgatggaattgttttcaggcaaccgaacaatt
cccatagaagatgcacacacagataagactgtcaataatggcggagagatcaatttatcc
agtgcggatttggaggctgctttaaaaaatgctgaagatgaggcagactatatggcattg
aagaaagttgaagaagaagaggctgtggataatcaggaattcacagaggaagccattgga
aaactggaagacgatgaactagttaatgaagaggacataaagccagatgatactgctgag
catggtgggtttaaaacaaaatcagatgaaggtttcattagcagaagtcatccacttgag
gtgaatcctcttgttttaactggtgaagaagatgatgttgatatgttgggcgatgtgaaa
cagatggctgcggcagcagctgcagcaggacaaacaatcctgtcttttgaggatcagcta
cgcccaattgaccagtatgctgtacgttttctagaattatgggacccaattatagataag
gcagcagtggaatcacatgttcagattgcggaagctgaatgggagttggaacacattgag
aagttaaaggatgatatggaagccgagatcgatgatgatgaagagcctttagtctatgaa
agatgggattccgatttcgcaactgaagtatacaggcaacaagttgaagctctagctcaa
catcagttaatggaagatctagaacgtgaagccaaggagaaggatgctttagaatataga
aattcagattatatcaggaatgatgtttcttcggctcctaaacccaagtcaaagaaacga
aacaaaaaggccaagttcaaatctttgaagaaaggggctctagtttctaaatctgtatct
gtcaaaacagagtcttccactgaaccaatgtccatagatgattcgatgtatgatgagatg
atcacatcatcagatgctttatctccaagctcaacccgggagaagaagcgtaaacctgcc
ttagatgatgacgatctgatgagcaaaaagaagtctaaaaaagaagacattctccattcc
aaatcttccagcaaatactataacagtcataaagagctgaaaattttggataacggtttt
gttgatcttgagagtaagcaattaagtaggggcaaaatacaggggaaactatctatttct
gttatgcctctgaaacgggttttcaccataaaaccagaaaagttgaagaagaaaggtaac
atttggtctaaggattttccttcacctgacctttggtcaacacgtgaagatgctgtattg
tgtgccgtggttcatgagtatggcccaaattggaacttggcttgtgatatattgtatgga
atgactgctggcggattttatcgtggcagaattcgccatcctgtccattgctgcgagaga
tttagggaactaattcaaagatatgttttgtctggtggtgatgctaccaatactgacaaa
gcagttaataatgtttctgggaagggtcttcttaaagtaaccgaggataatatacgggtg
ttgcttagcatcacttctgaactaccagatcatgaaccgcttctacaaaagcattacttc
gctgcactttctgctgcttggaggttatcacgccccagccttagaaaaagctctttatct
gctcaaaatggattttattcttcttcacaatttggtgattcggtcaaccatcagaattcc
ttgaggaaatcatcagaaatgctggaatttacaaatttatatcagtgtggggtcttagtc
gcagccgccctagatggtgactccagttatcatactgatgaagtgtcaagcattgtgaac
caaagcaatgaagttttggttgcaaaagagcgattggatattactcttgcacttcaagga
gagagggatgaaataactccccttccctctactgctgatctttcaattcttggcccagac
cctcccccatccttgaagatgcatgctagtgaagatggtaatttcaaatcttcctggagt
ctggttgaaaaccaattcagaatcccccgaccccaatgtgttgaagggttattcggtgaa
gaattgttaggatttcccattgggagacagaagctccttgtttctgagtcggtaaagcct
tctaaatcgaagttaaaaagaactggtattgagagtgctgatttgaattgtcttaccgcc
agtcaagtgttccaacctctgccattgacagtcagtgactctagtccgaattttgatgaa
ttttcatcttttttccatgatggaggagttgaatgcgacaatgaatatctgcttggtacg
gataacgaaattgcttctttgggcagcacgttgggaatagattcactcgaaatttggccg
gatttgacatctgaactggatgattggtcattgttacctgaatttactgatattggataa
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integrated database retrieval system
