Primulina eburnea: 140842828
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Entry
140842828 CDS
T11060
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pebu Primulina eburnea
Pathway
pebu00040
Pentose and glucuronate interconversions
pebu01100
Metabolic pathways
Module
pebu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140842828
Enzymes [BR:
pebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140842828
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
140842828
NCBI-ProteinID:
XP_073067110
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All DBs
Position
10:6283937..6287305
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AA seq
459 aa
AA seq
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MLLQKHILPYLIGVLSLSLCCSCIIHDDDHLSRDYDSQEEVGYDFRAYPSYFNLDQGVEF
DNSSIEFDGKLSGFDEFKRDTASSSTNYKTINVLNYGAKGDGHTDDSKVFLNAWKEACSS
IYGVNFVIPRGRSYFLKPIRFTGPCKSDIIIQISGTLIASNDRSDYSKDGRHWIVLDSVQ
NLQVEGGGTIDGNGNIWWQNSCKINKAKPCKDAPTALTFLKCANLVVNNLKIQNAQQIHL
SFEKCTNVEASNLVVNAPEKSPNTDGIHVTATQNIRISSCTIGTGDDCISIVSGSARIQA
TGITCGPGHGISIGSLGARNSEAHVSDVVVNGAKLSGTTNGVRIKTWQGGSGSASNIKFQ
NVEMQNVKNPIIIDQNYCDQDGPCKQQASAVQVKNVVYQNIKGTSASNVAIDFDCSKSHP
CQGIVLQNVDLTGYGGGKAKAVCNNVNLQKYGTVTPSCP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcaaaagcatattctaccatacttgattggtgtcctctcattaagtttatgt
tgctcttgtatcatccacgacgacgatcatttgtctcgcgattatgactcccaagaagaa
gttggctacgattttcgggcttacccctcctatttcaacctcgaccaaggcgtcgagttt
gacaatagttcaatcgagtttgatggcaagctttctggcttcgacgaattcaaaagagat
accgcgtcgtcatcgaccaattataaaaccatcaatgtgctcaactatggagctaaaggt
gatggacatacagatgattcgaaggtatttctgaacgcgtggaaggaagcttgctcgtct
atttatggtgttaattttgtgattccccggggaagaagttatttcttgaaaccaataagg
tttacaggaccttgtaaatctgacataataatacagatatctggaacccttattgcatcc
aacgatcgctcagactacagtaaagatgggaggcactggatagttcttgacagtgttcaa
aatcttcaagttgaaggtggtgggactattgatggcaatggcaatatttggtggcaaaac
tcttgcaaaataaataaagccaagccttgcaaggatgctccgacggctttgacatttttg
aagtgcgcaaacttggtagtaaataatctaaagatacaaaatgcacagcaaattcacttg
tcctttgagaagtgcacaaacgttgaggcttccaatcttgtagtgaacgcaccagagaag
agccccaacactgatgggatccatgtgacagccactcaaaacatccgtatttcaagttgc
accattggcacaggtgatgactgcatttcaattgtgagtggatcagcaaggattcaagcc
acaggcatcacttgtggacctggacatggcatcagtattggaagcttaggtgcccggaat
tcagaagctcatgtgtctgatgttgttgtcaatggagcaaagttatctggtaccacaaat
ggagtaagaattaagacatggcagggtggatcaggaagtgcaagcaatatcaagttccag
aatgtggagatgcaaaatgtgaaaaaccctataatcatagaccaaaactattgtgaccaa
gatggaccatgcaaacaacaggcatcagctgtacaagtaaaaaatgttgtgtaccaaaac
atcaaaggcacaagtgcttcgaatgtagctatcgatttcgactgcagcaaaagccatcca
tgccaaggaattgtattgcaaaatgtggatttaacagggtatgggggaggaaaagctaaa
gctgtttgcaacaatgtcaatttacagaaatacggaacggttacaccaagctgcccataa
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