Primulina eburnea: 34730817
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Entry
34730817 CDS
T11060
Symbol
rpoA, CSD74_pgp035
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pebu Primulina eburnea
Pathway
pebu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
34730817 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pebu03021
]
34730817 (rpoA)
03400 DNA repair and recombination proteins [BR:
pebu03400
]
34730817 (rpoA)
Enzymes [BR:
pebu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
34730817 (rpoA)
Transcription machinery [BR:
pebu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
34730817 (rpoA)
DNA repair and recombination proteins [BR:
pebu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
34730817 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
GSDH
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
34730817
NCBI-ProteinID:
YP_009437500
UniProt:
A0A291F749
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Position
Pltd:complement(77922..78974)
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AA seq
350 aa
AA seq
DB search
MVREKVTVSTRTIQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPGYVTAQD
IILPPYVEIVDNTQHIASLIEPIHFCIGLEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR
NVNHSIHSYGNRNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDKKEENIPLE
DNQHMVPLAQFTFHEKLDKLRKNKKRIALKSIFIDQSEFSPRVYNCLKRSNIYTLLDLLN
NSQEDLMKIDHFNLEDVKQILGILEKHFAVDLPKKRFSICSAIDVFERDS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacaatacagtggaaatgtgttgaatca
agaacagacagtaaacgtctctattatgggcgctttattctctctccacttatgaaagga
caagccgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgtaaaatctgagaacgtcccgcatgaatattctacaataacgggtatt
caagaatcggttcatgagattttaatgaatttgaaagaaattgtattgagaagtaatcta
tatgggacttgtgaagcgtctatttgtgtcagaggtcctggatatgtaactgctcaagat
atcatcttaccgccttatgtagaaatcgtcgataatacacaacatatagctagcttgatc
gaaccaattcatttttgtattggattagaaatcgagagaaatcgtggatatcttataaaa
atgccacataactttcaagatggaagttatcctatcgatgctgtattcatgcctgttcga
aatgtgaatcatagtattcattcctatgggaatcggaatgaaaaacaagagatactgttt
ctagaaatatggacaaatgggagtttaactccgaaagaagcacttcatgaagcctcccgg
aatttgattgatttatttattccctttttagataagaaagaagaaaacatacctttagag
gacaatcaacacatggttcctttagcccaatttacctttcacgagaaattggataaactc
agaaaaaacaaaaaaagaatagcattgaaatcgatttttattgaccaatccgaattctct
cccagggtctataattgcctaaaaaggtccaatatatatacattattggaccttttgaat
aacagtcaagaagatcttatgaaaattgatcattttaacctagaagatgtaaaacagata
ttgggcattctagaaaaacatttcgcagttgatttaccaaaaaagaggttttcaatctgt
agcgcaattgatgtattcgaaagagattcataa
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