Pectobacterium parmentieri SCC3193: W5S_0097
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Entry
W5S_0097 CDS
T02514
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pec03021
]
W5S_0097
Transcription machinery [BR:
pec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
W5S_0097
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AFI88236
UniProt:
A0A0H3HWN1
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Position
111878..112735
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AA seq
285 aa
AA seq
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MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFAGGIEEDNWDTHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacga
ctgcattatcagggcgatctggaggctgctaagcacctgattctgtcacacctgcgcttt
gttattcacgttgcccgcaattattccggttacggcctgccgcaagcggacctgattcag
gaagggaacatcggcctgatgaaggcggtacgtcgcttcaaccctgaagttggcgtgcgt
ctggtttctttcgccgtgcattggatcaaagctgaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtggcgaccaccaaagcacagcgtaagctgttctttaacctgcgg
aagacgaaaacacgtctcggctggtttaatcaggatgaggtcgaactggtcgcgcgtgaa
cttggcgtgaccagcaaagacgtgcgtgagatggaatcccgtatggcggcgcaggacatg
acgttcgatccgacgccggaagaagattctcacgacggcaaagcgatgtcgccaatgctt
tacctacaggataaatcgtctgactttgccggtggcattgaagaagacaactgggatacg
catgcggccgataagctcacctacgcgctggaagggctggatgaacgtagccagcacatt
attcgcgcgcgctggctggatgatgacaacaaatccaccttgcaggaactggccgaccaa
tacggcgtttccgcagagcgtgtgcgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcctaa
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