Pectobacterium parmentieri SCC3193: W5S_0103
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Entry
W5S_0103 CDS
T02514
Name
(GenBank) High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec02010
ABC transporters
pec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W5S_0103
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W5S_0103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_0103
Transporters [BR:
pec02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
W5S_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
AAA_29
BCA_ABC_TP_C
RsgA_GTPase
AAA_25
nSTAND3
AAA_23
MMR_HSR1
TsaE
AAA_14
AAA_15
AAA_22
NB-ARC
AAA_33
NACHT
Roc
Septin
Spectrin_SESTD1
DO-GTPase2
AAA_13
cobW
Motif
Other DBs
NCBI-ProteinID:
AFI88242
UniProt:
A0A0H3I0Z1
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All DBs
Position
117916..118617
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AA seq
233 aa
AA seq
DB search
MLSLHQVSAHYGKIQALHQVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATEGSITF
DGKDITHWQTAQIMREAIAIVPEGRRVFSRMTVEENLAMGGFFAERDQYQERIARVYDLF
PRLYERRAQRSGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIILQIFDTIQQLR
EEGMTIFLVEQNANQALKLADRGYVLENGHIVLEDTGAALLANEAVRSAYLGG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattacatcaggtttctgcccactacggaaaaattcaggcgctgcatcaggtt
agcctgcatattaatcagggcgagattgtcacgttgatcggtgctaacggtgccggtaaa
accacgttgctgggcacgctgtgcggcgatccgcgtgcaacggaaggctcgattacgttt
gacggtaaggacatcacacactggcagacggcgcagattatgcgcgaagcgatcgcgatt
gtgccggaaggtcgtcgcgtcttttcccgcatgacggtagaagaaaatctggcgatgggt
gggttctttgccgagcgcgatcagtatcaggagcgcattgcgcgcgtctacgatctgttc
ccgcgcctgtatgagcgacgcgcccagcgttccggcaccatgtctggcggtgagcagcag
atgctggcgattggtcgtgcgctgatgagccagccgcgtttactgctgctggacgagcca
tcgttggggctggcaccgattattattttgcaaatttttgatactatccagcaactgcgc
gaagagggcatgactatcttcctggtggagcaaaacgccaatcaggcgctgaaactggct
gaccggggttatgtacttgaaaacggccatatcgtattggaagataccggtgcggcattg
ttagctaatgaagcggtacgttcggcctatctaggcggataa
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