Pectobacterium parmentieri SCC3193: W5S_0186
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Entry
W5S_0186 CDS
T02514
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
W5S_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_0186
Enzymes [BR:
pec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W5S_0186
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W5S_0186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
TrwB_AAD_bind
AAA_22
AAA_19
zinc-ribbons_6
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AFI88325
UniProt:
A0A0H3I3E6
LinkDB
All DBs
Position
complement(208556..210754)
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AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPTGGMTPQVGTRVSVSFGNRKAIGIITALSDTSALPLEQL
KPVHDVLDEQPLFPPSLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPVYRHQVSEIGLTETALQALRSKGLCELTAAE
QTPHDWRQSFSMATERLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSALNDSERLAVWLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPIVMGTATPA
LETLHNVQNGKYRRLNLTKRAGNAALAKQHVIDLKSLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQKMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPIFPDVPITRIDRDTTSRKGALEQQLSQVRQGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PDHPLLQTLLHQGYDAFASQALTERKSVFLPPFTSHILFRADDHDNQQAALFLQQLRNLL
EASPLRDESLWLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLALIGTLPQARK
VKWVLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccgctggcacgtacattcgattatttgcta
cccacaggaggaatgactccacaagtcggcacacgcgtcagcgtctcttttggcaaccgt
aaagctatcggtatcattaccgcactgagcgacaccagtgcacttccacttgaacaattg
aaacccgtgcatgacgtgctggacgaacagccgctgtttccccccagcctgtggcgtatt
ttgctgtgggccgtcgagtactatcactacccgattggcgaagtgctgttccatgcgttg
ccgatcttgctacgtcaggggaaacccgcacaccgcgcaccgctctggcaatggtttgcc
accgaacaaggccgggcgacaccgctcagcacgctcaaacgcgccgctaagcagcagcag
gcgctggcggctttacttcagtcgccagtttatcgccatcaggtgagcgaaatcgggttg
acagagacagcgttacaggcgctgcgtagcaaagggttgtgcgagttaacagccgcagag
caaacccctcacgactggcgtcaaagctttagcatggccaccgagcgcctgcgcctgaat
acggaacaggccaccgccgtcggcgctatccgcagcgaagataaccactttgccgcctgg
ttgctcgcgggcatcactggctcaggtaaaaccgaagtctatctcagcgtgttggaaaac
gtgcttgcacagggtaaacaggcgctggtattagtgccggaaattggcctgacaccacag
accatcgcccgcttccgcgaacgttttaacgccccggtggatgtgctgcactcggcactc
aacgacagtgaacgccttgctgtttggctgcgcgcccgcagtggcgaagcggcgatcgtc
atcgggacgcgctcggcactatttaccccctttgcccgtttagggctgattgtgatcgat
gaagaacacgacagctcctataaacagcaagaaggttggcgctatcacgcccgtgatttg
gccgtcttccgcgccagagaggaagatattccgatcgtgatgggaacggcgacgcccgcc
ctggaaacactccataacgtccaaaacggcaagtaccgtcgattaaacctgaccaaaaga
gcgggcaacgccgcactggccaaacagcacgttatcgatctgaaaagcctgccgctgaca
gcaggattatcccagccgctgattacccgtatccgtcaccatctaacgaacgataatcag
gttattttgttcctcaatcggcgcggattcgcccccgtagtcatgtgccatgagtgcggc
tggattgccgaatgtcagcgctgcgatcactattatacctaccaccagcatcaaaagatg
ttgcgctgccaccactgcgacagccagcgtccggtaccacaacagtgccccggctgcggc
tcgaccaatatggtgcccgtcggtctgggcaccgagcagttggagcaaagccttgccccg
atctttccagatgttccgatcacccgcatcgaccgtgataccaccagccgtaaaggcgcg
cttgagcagcagctctcacaggtcaggcagggaggtgcgcgtcttcttatcggtacacaa
atgttggcgaaagggcaccatttccctgacgtaacgctggtggccttgctggacgtcgac
gggtcactgttctccgccgacttccgcgcagccgaacgtttcgcccagctctacactcag
gtggcgggtcgcgcagggcgtgcaggcaaggctggcgaggtggcgctgcaaactcaccac
ccagaccatccactattgcaaacgctgctgcatcagggctacgacgcctttgccagtcag
gcacttaccgaacgaaaaagtgtttttctgccgccgtttaccagccatatcctcttccgt
gctgacgatcacgataatcagcaggccgccttattcctccagcaattgcgcaatttactg
gaagccagtcccctacgggatgaatcactctggctgctgggcccggtgcctgctttacag
ccaaaacgtgcagggcgcttccgctggcagctcctgctacagcacccttccagagcgttg
ctacagaaactggtcagaacatcgttggcgctaatcggcacactaccgcaggcacgtaag
gtgaaatgggtgctggatgttgaccccacggacggttag
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