Pectobacterium parmentieri SCC3193: W5S_0292
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Entry
W5S_0292 CDS
T02514
Name
(GenBank) UPF0042 nucleotide-binding protein yhbJ
KO
K06958
RNase adapter protein RapZ
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pec03019
]
W5S_0292
Messenger RNA biogenesis [BR:
pec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
W5S_0292
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_28
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AFI88419
UniProt:
A0A0H3HYI1
LinkDB
All DBs
Position
complement(325626..326483)
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AA seq
285 aa
AA seq
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MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELANTLAARNISAAVSIDVRNM
PESPEIFEHAMEQLPSSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKPS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgattgtcagcggtcgctcaggttcaggaaaatctgtcgccctgcgcgca
ttggaagatatggggttctactgcgtagataatctaccagtggttctgctgccagaactg
gcgaatacgctcgctgctcgtaatatttccgcagcggtcagcattgacgtgcgcaatatg
ccggaatctccagagatcttcgagcatgccatggagcaactgccatcaagcttctcgcct
caactgctgtttctggatgccgatcgcaatacgctgatccgtcgctatagcgatacccgt
cgcctacacccgctgtccagcaagaatctgtcgttggaaagcgcgattgatgaagaaagc
gacctgctggaaccactgcgttcgcgcgccgatctgattatcgacacctcggagatgtcg
gtgcacgagctggccgaaatgctgcgcacacggctgctcggcaagcgggaacgcgagctt
acgatggtgttcgaatcgttcggtttcaagcacggcattcctatcgatgcggattacgtc
tttgacgtgcgtttcctgccgaacccgcactgggacccaaaattgcgcccgatgacgggt
ctggataagcccgtagcgtccttcctcgatagacataccgaagttcacaatttcatctac
cagactcgcagttatctggaactgtggctgccgatgctggaaaccaataaccgtagctat
ctgaccgtcgccattggctgtaccggcggtaaacaccgttcggtgtacgtcgcggagcag
ttggcagactacttccgctcacgcggtaagaacgtacagtcgcgccaccgtacactggaa
aagcgtaaaccctcgtaa
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