Pectobacterium parmentieri SCC3193: W5S_0295 Help Entry W5S_0295          CDS       T02514                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism pec  Pectobacterium parmentieri SCC3193 Pathway pec02020   Two-component system pec02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pec00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     W5S_0295  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     W5S_0295  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pec03021]     W5S_0295 Transcription machinery [BR:pec03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      W5S_0295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  AFI88422 UniProt:  A0A0H3I1H1 LinkDB All DBs Position complement(327503..328936) Genome browser AA seq 477 aa AA seqDB search MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDQHDEIESFE KADSDSLDTGEALEQRDMPEELPLDATWDEIYSAGTPSGTGSDYRDEELPIYQGETTQTL QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVPLEDILDSIGDDDVTLEEVEAVLK RVQRFDPVGVAARDLRDCLLVQLSQFDNRTPRLLEARLIVSDHLDLLANHDFRSLIRVTR LKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKIQGVWVVELNTDSVPRLQIN QQYAALGNSARNDSDGQFIRSNLQEARWLIKSLESRNDTLLKVTRRIVEQQQDFFEQGEE FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI RALVKKLIAAENPAKPLSDSKLTTLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLI NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtttgcaactcaggcttagccagcaactggccatgactccacagctccaa caggcaattcggctgttgcagttgtccacgcttgaattgcaacaggagattcaactggcg ctggaaagcaatccgttgctcgagcaaacggatcagcacgacgaaatcgagtcattcgaa aaggcagacagcgattcactggataccggtgaagcccttgaacaacgggatatgccggaa gaattgccgctcgacgccacctgggatgagatttattccgcaggcacaccgtcgggcacg ggttctgactatcgcgacgaagaactgcccatttatcaaggcgaaaccacgcaaacgctt caggattacctgatgtggcaggttgagctgacgccgttttcagatactgatgcggccatc gcaacgtcgattgttgatgcggtggacaacaccggctaccttaccgtgccgctggaagac attcttgacagcatcggtgacgacgacgtgacgctggaagaggtcgaagccgtacttaaa cgcgtgcagcgctttgatcccgttggcgtcgccgctcgcgatctgcgtgattgcctactg gtacagctttctcagtttgacaaccgtacaccacgcttgctcgaagctcgcctgatcgtc agcgatcatctcgatctgttagccaatcatgatttccgtagcctgatccgcgtgacccgt ctgaaagaggaagtgctgaaagaagcgctggcgctgatccaatcgctcgatccacgtccg ggtcagtcaattaacaccggtgaatccgaatatgtgatccctgatgtgctggtgcgcaag atacagggcgtgtgggtcgttgaattgaacaccgacagcgtcccccgtttgcagattaac caacaatatgcagcactgggtaacagcgcgcgcaacgacagcgacgggcaatttatccgc agtaacctgcaagaagcacgctggctcatcaaaagtctggaaagtcgcaacgatacgctg ctgaaagtaacccgtcgcatcgtcgagcagcagcaggatttcttcgagcagggtgaagaa ttcatgaagcccatggtattggcagacatcgcccaagcggtagatatgcatgaatccacc atctcacgcgtgacaacacagaagttcctgcacagcccacgcggcatttttgagctaaaa tatttcttctccagccacgttaataccgatagcggcggagaagcttcgtcaacggctatc cgcgcgctggtgaaaaagcttattgcagcggaaaaccctgcgaagccattaagtgacagc aagctcaccacgctgctctccgagcagggcatcatcgtggcacgccgtaccgtcgcaaaa taccgagagtctttatctatcccaccatcaaatcagcgtaaacaactgatttga

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