Pectobacterium parmentieri SCC3193: W5S_0397
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Entry
W5S_0397 CDS
T02514
Name
(GenBank) TRAP transporter solute receptor, DctP family
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W5S_0397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_0397
Transporters [BR:
pec02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
W5S_0397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
HHH_9
Motif
Other DBs
NCBI-ProteinID:
AFI88524
UniProt:
A0A0H3HYR9
LinkDB
All DBs
Position
complement(429693..430670)
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AA seq
325 aa
AA seq
DB search
MKLSKTLIGICLGSTAFLMSQAIQAQQIKASDVHPEGYPNVVAVQKMGEKLKAATNGRLE
IKTFPGGVLGDEKQMIEQAQLGAIDIIRVSMTPVAAILPEIEVFTLPYIFRDEDHLHKVL
DGKIGQEIGDKITHSSKSKLVFLGWMDAGTRNLITKQPVAKPEDLKGMKIRVQTSQVALA
TLKAMGANAIAMGTSEVFSGMQTGVIDGTENNPPTYVAHNYMPVAKNFTWSRHFIIPELF
LYSKTKWDKLSKEDQDLILKLAKEAQQEQRVLWNEYTQQSLDKMKAGGVQFHEIDNEYYF
KATQPVRDQFGAKYQDLIKAVADVQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtcgaaaacattgatcggcatttgtctgggttctactgcattcctgatgagc
caagcgattcaggcacaacaaattaaagcctctgatgttcaccctgaaggttatcctaat
gtcgtcgccgtacagaaaatgggagaaaaattaaaagctgctaccaatggcaggctggaa
attaaaaccttccccggcggcgtattaggggatgagaagcaaatgattgaacaggcgcag
ctcggtgcaattgatattatccgtgtttcaatgacgcccgttgccgctattttaccagaa
atagaagtcttcaccctgccctatattttccgtgatgaagatcatctgcataaagtgctg
gatggaaaaatcggtcaggaaattggtgacaaaattacccatagcagtaaatcaaaattg
gttttcctgggctggatggatgcgggaacgcgtaatttaatcaccaagcaacccgtggcg
aaaccagaagatctcaaaggtatgaaaattcgcgttcaaaccagccaggttgctctcgca
acgctgaaagctatgggcgctaacgccatcgctatgggcaccagcgaagtcttcagcggc
atgcaaaccggagtgattgacggcaccgaaaataatccaccaacttatgtggcacataac
tacatgcctgttgccaagaatttcacctggagtcgccacttcattattcctgagctgttc
ctgtactccaaaaccaaatgggataagctttccaaggaagatcaggatctgatcctgaaa
ctggcgaaagaagcgcagcaagagcagcgcgtactgtggaatgaatatactcagcaatcc
ctggataaaatgaaggccggtggcgttcagttccatgaaatcgataacgagtactatttc
aaagcgacacagcctgtacgcgatcaatttggtgccaaatatcaggatctgattaaagcc
gtcgccgacgtccaataa
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