Pectobacterium parmentieri SCC3193: W5S_0564
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Entry
W5S_0564 CDS
T02514
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_0564
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
W5S_0564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
SLFN-g3_helicase
AAA_22
ABC_tran
AAA_14
Rad51
RecA_N
AAA_16
nSTAND_NTPase5
AAA_24
NTPase_1
nSTAND3
AAA
AAA_5
cobW
Zeta_toxin
Herpes_Helicase
Viral_helicase1
AAA_29
T2SSE
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
AFI88690
UniProt:
A0A0H3I4A6
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All DBs
Position
complement(611679..613061)
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AA seq
460 aa
AA seq
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MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLASASVSRSDRLTGYAGESAGV
SRVQKLSEISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLNLPTQNLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLLSLVSSFRDRPLPQDLVIFGEVGLAGEIRPVPSGQERITEAA
KHGFKRAIVPHANMPKKAPASMQVFGVKKLADALAILDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagccgtcaaacgggcgtttgtatgtaatgaatgtggggctgattacccacgc
tggcaagggcagtgcagcgcctgccacgcctggaataccattactgaagttcgcctggcg
tcggcgtccgtatcacgctccgaccgtctcaccggctatgcgggtgagagtgcaggtgtc
agccgggtgcaaaaactctcggaaatcagccttgaagcgttaccccgcttttccactggc
tttcaggaatttgaccgcgttctgggcggcggcgtcgttccgggcagcgcgatcctgatc
ggcggcaaccccggcgcaggtaaaagtaccctgctgctgcaaacgctctgcaagctgtca
gaaaatatgaaaaccctgtacgttaccggggaagaatccttgcagcaggtcgcgatgcgg
gcacacaggctcaatctgccgacccagaatctcaacatgctgtcagaaaccagcatcgaa
caaatttgcctgattgccgagcaggaacagccgaagctgatggtgatcgactccattcag
gtcatgcatctcgccgatattcaatcgtcccccggcagcgtagcgcaggtgcgcgaaacc
gccgcctacctgacgcgcttcgccaaaacgcgcggcgttgctatcgtgatggtcggccac
gtcaccaaagacggttcactcgctggtccgaaggtattggaacactgcatcgactgttcc
gtgctgctggacggtgatgccgattcacgcttccgtaccctacgtagccataaaaaccgt
ttcggtgccgtcaatgagttgggcgtgttcgccatgacggaacaagggctgcgtgagatc
agcaatccatcggccattttcctcagccgcggggatgaagtgacgtccggtagctcggtc
atggtggtgtgggaaggtacacgcccgctgttggttgagattcaggcactggtagatcaa
tcaatgatggctaacccgcgtcgcgttgccgtcggattagagcaaaaccgcctggcgatc
ctgctggcagtactgcatcgccacggcggcttgcagatgtcagatcaggatgtgttcgtg
aacgtcgtcggcggcgtcaaagtgaccgaaaccagtgccgatctggcgctgctgctatcg
ctggtttccagcttccgcgaccgcccgctgccgcaggatctggtcatcttcggtgaagtc
ggtctggctggcgaaattcgtccggttcccagcggacaagagcggattaccgaggccgcc
aaacacggttttaaacgcgccatcgttcctcatgccaatatgccgaagaaagccccagcc
agcatgcaggtgttcggcgtgaaaaagctggccgacgcgctggcgatcctcgacgatctc
taa
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