Pectobacterium parmentieri SCC3193: W5S_0617
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Entry
W5S_0617 CDS
T02514
Name
(GenBank) L-rhamnose operon transcriptional activator RhaR
Organism
pec
Pectobacterium parmentieri SCC3193
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Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
AraC_binding_2
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AFI88742
UniProt:
A0A0H3I2D0
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Position
675582..676427
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AA seq
281 aa
AA seq
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MAKDWLELRQHADTGIETIKAHFEGHAYDPHWHDSYLVGVTLSGTQQFHCRRERHRSRPG
DAFLLEPGEIHDGDAPVDGGFTYLTFYLDEQWLTNALHGLHESTPGSYSLHFAQTLTREP
QLVRSIGDTFTTLHNDEMKIVQQSTMDNLLLQITAHCHWRKKLPSQLQSTAVAHRARDYL
YAHVGENIGLSDLARETGTDRFTLTRCFKREFHLAPHAWLIQLRLAKARQLLAYGDQPAD
VAAALGFSDQSHLGRWFQRAYRISPAHYRRLCTNLPDVSRR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagactggcttgagctacgtcagcatgcagatacggggattgaaacgatcaag
gcgcactttgaggggcatgcctacgatccacactggcacgacagctacctcgtgggggtg
accctttccggcacgcagcagtttcactgccgccgtgagcggcatcgtagtcgtccaggt
gacgcatttttgctggaaccgggtgaaattcacgacggtgatgcgccggtcgatggcggg
tttacctatctgacgttttatcttgacgagcagtggctgaccaatgcgctgcacggcttg
catgagtccactcccggaagttactcactccattttgcgcaaacactaactcgcgagcca
cagttggttcgttcgattggcgatacgttcaccacgcttcacaacgatgagatgaaaatt
gtgcagcagagcaccatggataatctgctcttgcagatcactgcgcattgccactggcga
aaaaagctaccatcacagttgcaaagcacagcagtggctcatcgcgcacgcgattatctt
tatgcgcatgtgggcgaaaatatcggcctgtctgacctcgcccgggagacgggcaccgat
cgcttcacgttgacgcgctgctttaaacgtgaatttcatctggctccgcacgcctggctt
atccaacttcgtttggcgaaagcacggcagttactggcatacggcgatcagcctgccgat
gtggctgcggccctgggtttctccgatcaaagccatcttggtcgctggtttcagcgggca
tatcggatctcgcctgcccattaccgtcggttatgcacaaaccttccagacgtttccaga
agatag
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