Pectobacterium parmentieri SCC3193: W5S_0626 Help Entry W5S_0626          CDS       T02514                                  Name (GenBank) 60 kDa chaperonin   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism pec  Pectobacterium parmentieri SCC3193 Pathway pec03018   RNA degradation Brite KEGG Orthology (KO) [BR:pec00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     W5S_0626  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pec03019]     W5S_0626    03110 Chaperones and folding catalysts [BR:pec03110]     W5S_0626    03029 Mitochondrial biogenesis [BR:pec03029]     W5S_0626   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pec04147]     W5S_0626 Enzymes [BR:pec01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      W5S_0626 Messenger RNA biogenesis [BR:pec03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      W5S_0626 Chaperones and folding catalysts [BR:pec03110]  Heat shock proteins   HSP60 / Chaperonin    W5S_0626 Mitochondrial biogenesis [BR:pec03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     W5S_0626 Exosome [BR:pec04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    W5S_0626   Exosomal proteins of other body fluids (saliva and urine)    W5S_0626   Exosomal proteins of breast cancer cells    W5S_0626   Exosomal proteins of colorectal cancer cells    W5S_0626   Exosomal proteins of bladder cancer cells    W5S_0626 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-ProteinID:  AFI88751 UniProt:  A0A0H3HY24 LinkDB All DBs Position 684278..685924 Genome browser AA seq 548 aa AA seqDB search MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVIAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV RVAAKLASLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANTVKAGEGNYGYNA ATEEYGNMIDFGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG MGGMGGMM NT seq 1647 nt NT seq  +upstreamnt  +downstreamnt atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctacgcggcgtg aatgtactggctgatgcagtgaaggttaccctgggcccgaaaggccgtaacgtagttttg gataaatccttcggtgcaccgaccattactaaagacggcgtatctgtagcgcgtgaaatc gaactggaagacaagttcgagaacatgggcgcacagatggtgaaagaagttgcctctaaa gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggcgcaggcaatcatc actgagggcctgaaagctgttgcagcgggcatgaacccgatggatctgaagcgcggtatc gataaagctgttatcgctgctgttgaagagctgaaaacactgtctgtaccgtgctctgac tctaaagctatcgctcaggttggtactatctctgctaactccgacgaaaccgtaggcaaa atgattgccgaagccatggataaagtcggtaaagaaggtgttatcaccgttgaagaaggt accggtctgcaagacgagctggacgtggttgaaggtatgcagtttgaccgcggctacctg tctccgtacttcatcaacaagccagaaactggtgctgtagaactggaaagcccgttcatc ctgctggctgacaaaaaaatctccaacatccgcgaaatgctgccagtactggaagccgta gcgaaagcgggcaaaccgctggttatcgttgctgaagatgttgaaggcgaagcgctggca acgctggtggttaacacgatgcgtggcatcgtgaaagtggctgcggtgaaagctccgggc ttcggcgaccgtcgtaaagcgatgctgcaagatatcgctacgctgactggtggtaccgtt atctctgaagagatcggtctggaactggaaaaagcgacgctggaagatctgggtcaggca aaacgcgttgttatcaacaaagacaccaccaccatcatcgatggtacgggtgaagaagct gcgatccagggccgtgttgctcagatccgtcagcaggttgaagaagcaacctcagattac gacaaagaaaaactgcaagagcgtgtggctaaactggctggcggcgtagccgttatcaaa gttggcgcagcaactgaagttgaaatgaaagagaagaaagcacgtgttgaagatgccctg gctgcgactcgcgctgcggtagaagaaggcgtggttgctggtggtggcgtggcgctggtt cgcgttgcagctaaactggcttctctgactgctcagaacgaagaccagaacgtgggtatc aaagttgcgctgcgcgcgatggaagctccactgcgtcagatcgtttccaacgctggtgaa gagccatctgtggttgcgaataccgttaaagcgggtgaaggtaactacggttacaacgcg gcaactgaagaatacggcaacatgatcgacttcggtatcctggatccgaccaaagttacc cgttctgcgctgcaattcgcggcttccgttgctggtctgatgatcaccaccgaatgtatg gtcaccgacctgcctaaaggcgatgcgcctgacttaggtgctgctggtggcatgggcggt atgggtggtatgggcggcatgatgtaa

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