Pectobacterium parmentieri SCC3193: W5S_0670
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Entry
W5S_0670 CDS
T02514
Name
(GenBank) Trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_0670
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
LacI family
W5S_0670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
MptE-like
HTH_23
HTH_3
MarR_2
HTH_Tnp_ISL3
HTH_38
HTH_7
HTH_31
HTH_IclR
Sigma54_DBD
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AFI88795
UniProt:
A0A0H3I4L0
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All DBs
Position
complement(735094..736035)
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AA seq
313 aa
AA seq
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MNKLTIKDIAALCKVGKSTVSRVLNNDQNVNEVTRQKVLAVIEQYQFTPSKSARAMRGLA
SRTVGIIVTRLDSYAENQTVRAILPLLHANGIDPIILESQFDPKKVDEHLTMLERRKIDG
VILFAFTGLASEQLASWQQRIVIIARSFDGYTCVCNDDTGTVNHLMEFLHQEKKFNQIGY
IGIDLQDETTGLLRFKAYENYCQQHRLTINAELGELNFQSGYLLAQKVLSSRPQAILCAT
DSLAFGVQKYLKTQMINDVFVACIGRNDLLKFLFPETKTCRLGFRESGELSANLLINIIN
DNFSPKTHIVLSS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattgacgataaaagacatagcggccctttgtaaggtgggaaaatcgactgtt
tcccgtgtactcaataacgaccagaatgttaatgaagttacacgccaaaaagtgctcgcg
gtgattgagcagtatcaattcacaccgtcaaaatcagccagagcgatgcgtggattagcg
agcagaaccgttggaattatcgtgacccgccttgattcttatgcagaaaaccaaacagta
agagccattttaccccttttgcatgctaatggtatcgaccctattattctggaaagccag
ttcgaccccaaaaaagttgatgaacatttaactatgttggaacggcgaaagattgatggc
gtcatattattcgccttcacagggctcgccagtgaacagttagcgtcctggcagcagcgt
atcgtcatcatcgcgcgttcatttgacggttatacctgtgtttgtaatgacgatacaggt
accgtaaatcatctcatggaatttttgcatcaagaaaaaaaattcaatcaaattggttac
atcggtattgatttacaagatgaaacaaccgggttactccgttttaaagcctacgaaaat
tattgccagcaacatcgattaaccattaatgccgagttaggggaactcaattttcaaagc
ggttacctgctcgcacaaaaggtactttcctcgcgtccccaagccattttatgcgccaca
gactcattagcctttggcgtacaaaaatacttaaaaacccaaatgatcaatgatgttttt
gtagcttgcattggccgaaatgatttactgaaatttttatttcccgaaacaaaaacctgc
cgtttagggttccgcgaaagcggcgaactctctgccaacctgttgattaacattattaac
gataatttctcaccaaaaacacacattgttttatcttcttga
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