Pectobacterium parmentieri SCC3193: W5S_0710
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Entry
W5S_0710 CDS
T02514
Name
(GenBank) Transcription termination/antitermination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pec03021
]
W5S_0710
03009 Ribosome biogenesis [BR:
pec03009
]
W5S_0710
Transcription machinery [BR:
pec03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
W5S_0710
Ribosome biogenesis [BR:
pec03009
]
Prokaryotic type
rRNA transcription factors
W5S_0710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
DUF4332
KH_NusA_C
KH_KhpA-B
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
AFI88832
UniProt:
A0A0H3I2M4
LinkDB
All DBs
Position
776069..777598
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AA seq
509 aa
AA seq
DB search
MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR
RWLVVNEVTLPTREITLDAAQFEDPSLDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTGAEAVIGREDMLPRENFR
PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEIIEIKAAARDPGSRA
KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV
SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK
HQAEAHAAIDVFTKHLDIDEEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR
ERAKAALTTLALAHEESLGDGQPAEDLLSLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL
TDIEELNDEQAGELIMAARNICWFGDDNE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgttgaagcagtttccaatgagaaatcccttccgcgc
gagaagatttttgaggcgttggaaaccgcactagcgacggcaaccaagaaaaaatacgag
caggaaattgacgttcgcgtcagtatcgatcgtaaaaccggcgattttgatacctttcgt
cgttggttggtggtgaatgaagtcactctgccaactcgtgaaattacgcttgatgctgcg
cagttcgaagatccttctcttgacgttggcggttatgttgaagatcaaatcgaatccgta
acctttgaccgtattactacgcaaacggcaaaacaggttatcgtacagaaagttcgtgaa
gctgaacgtgcgatggttgttgatcagttccgtgagcaagaaggcgaaattatcaccggt
gtcgtgaagaaggtgaaccgtgataatatttcacttgaagtcagaccgattgatggctct
aacactggtgcagaagccgttattggccgtgaagacatgctgcctcgtgaaaatttccgc
cctggcgatcgtattcgtggcgtgctgtactctgtacgtccagaagctcgcggtgctcaa
ctgtttgtcagccgttcccgcccggaaatgctggttgagctcttccgcattgaagtgcca
gaaatcggcgaagaaattatcgaaattaaggcagcggctcgcgatccgggttcacgtgcg
aaaattgcagtgaagacgaatgacaagcgtatcgatcctgtcggtgcttgtgtcggtatg
cgcggtgcgcgcgtgcaggctgtttccagtgaactgggtggcgagcgtattgatatcatt
ctgtgggatgacaatcctgcacagtttgtgatcaatgccatggcccctgccgatgtggta
tcgatcgtcgttgatgaagatacctgcacgatggatatcgccgttgagtcgagtaatctg
gctcaggcgattggtcgaaacgggcagaacgtccgtctggcttcccaactgttgaaacag
catcgttcagacgatcgttgggaactgaacgtgatgacagtggaagatcttcaagccaag
catcaggccgaagcacatgctgcaatcgacgtctttaccaagcacctggatattgatgaa
gagtttgccactgtgttggttgaagaaggtttctcctcacttgaagaactggcctatgtg
ccaatcaaggaactgctggctatcgaaggccttgatgaagaaaccgttgaagcattgcgt
gagcgagctaaagccgcattaacaacgctggcattggcgcatgaagaaagccttggtgac
ggtcaacctgctgaagacttacttagcttgcctgggctgtcgcgtgagttggcgttcaaa
cttgctgcgatcggtgtttgtacgctggaagatcttgctgaacagggcgttgacgacctg
acagatattgaagagctcaatgatgagcaagcgggcgaattgattatggccgcacgtaat
atctgttggtttggcgacgacaacgaataa
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