KEGG   Pectobacterium parmentieri SCC3193: W5S_0789
Entry
W5S_0789          CDS       T02514                                 
Name
(GenBank) Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF TadA subfamily
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    W5S_0789
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pec02044]
    W5S_0789
   02035 Bacterial motility proteins [BR:pec02035]
    W5S_0789
Enzymes [BR:pec01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     W5S_0789
Secretion system [BR:pec02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   W5S_0789
Bacterial motility proteins [BR:pec02035]
 Pilus system
  Pilus assembly proteins
   W5S_0789
SSDB
Motif
Pfam: T2SSE ABC_tran AAA_28 Zeta_toxin AAA_16 AAA_2 VapE-like_dom cobW TsaE IIGP RsgA_GTPase nSTAND3 KAP_NTPase GTP_EFTU Sigma54_activ_2 AAA_23 AAA_29 AAA_30 AAA_7 DEAD AAA_18 AAA_19 Dynamin_N Septin AAA_22 Sigma54_activat NACHT FtsK_SpoIIIE MMR_HSR1 PIF1 SLFN-g3_helicase ATP_bind_1 AAA_5 CbiA
Other DBs
NCBI-ProteinID: AFI88907
UniProt: A0A0H3I2U7
LinkDB
Position
860172..861575
AA seq 467 aa
MIRKNNLQKSEAGKSTPQPAPAANVAELKTRPAAENRTQPAANTSSGSAAPTARQTDNRT
SQRRIIRAQLYDQIDAGKAAMMGRDKLLVQIETVIRRICDEQRLQLSRQEEEAIATEMLD
EMTGIGPIQPLLSDDTVNDILVNGAGQVFVERFGKLELSPITFIDEEHVFNTAQRIAAAV
GRRIDEASPMVDARLPDGSRVNVITYPLAIDGTTISIRKFMRRNLSLEMLAERRCMSYAM
ADVLNKAMQARVNVIVSGGTGAGKTTLLNALSQKIGSTDRIITIEDAAELQLQQEHVVRL
ETRPVSAEGTGRIDQRDLMRNALRMRPDRIILGEVRGGESFDMLQAMNTGHDGSLCTVHA
NTSRDAIQRLENMVMMANMQLPLMAIRRQIASAVHLIVQIERMRDGMRRVVSITEVCGME
NEVIQLQDLFSFNIQGMDGQGLLTGEYVQHMQRPQFYSDKAHLFDAQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
ttgattcgcaagaataacctgcaaaaaagtgaagcaggaaaaagcacacctcagcctgcg
cctgccgctaacgtggcagaactgaaaacgcgcccggctgcggagaaccgcacgcaaccc
gcggcgaatacgtcttcagggtctgccgcccccaccgcccgccagacggacaaccggact
agccaacgccgtattatccgcgcacagctttacgatcagatcgacgccggtaaagcggcg
atgatggggcgtgacaagctgctggtacagatcgaaacggtaatccgccgcatctgtgat
gagcagcgcttgcagctttctcgacaggaagaggaagccatcgccaccgaaatgctggat
gagatgacggggatcgggccgatccagccgctgctgtcggatgacacggtcaacgatatt
ctggttaacggggctggtcaggtgtttgtcgaacgttttggcaagctggaactgtcgccg
attaccttcattgatgaagagcacgtatttaacaccgcgcagcgtattgcggcggcggtc
gggcggcgtatcgatgaagccagcccgatggtggatgcgcgtttgccggacggtagccgc
gttaacgtcatcacctatccgctggcgatcgatggcaccacgatttcgatccgtaagttt
atgcgccgcaacctgtcgctggaaatgctggcggagcgccgctgcatgtcctatgccatg
gcggatgttctgaacaaagccatgcaggcacgcgttaacgtgatcgtttctggcggtacg
ggggcgggtaaaaccaccttgctgaacgcgctatcgcagaagataggcagtaccgatcgc
atcatcaccattgaagatgccgctgaactgcaattgcagcaggagcatgtcgtgaggctg
gaaacccgccctgttagcgcagaaggaactggccgcatcgatcagcgcgatctaatgcgt
aacgcactgcgtatgcgccctgaccgtatcattttgggtgaggtgcgcggtggcgagagc
tttgacatgttgcaggcgatgaacacgggtcacgacggttcgctgtgtacggtgcacgcc
aatacctcgcgtgatgcgatacagcgtctggaaaacatggtgatgatggcaaacatgcaa
ctgccgctgatggcgatccgccgtcagatcgccagtgccgttcacctgatcgtgcagatt
gaacgtatgcgtgacggcatgcgccgtgtcgtgtccatcactgaagtatgcggcatggaa
aatgaagtgatccagcttcaggatctgttcagcttcaatattcaggggatggacgggcag
ggcctgttgacgggggaatatgttcagcacatgcagcgtccgcagttctacagcgataaa
gcgcacttgtttgatgcgcagtga

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