KEGG   Pectobacterium parmentieri SCC3193: W5S_0971
Entry
W5S_0971          CDS       T02514                                 
Name
(GenBank) Type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pec00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W5S_0971
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pec02044]
    W5S_0971
Secretion system [BR:pec02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   W5S_0971
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 NACHT TniB AAA_29 RsgA_GTPase Sigma54_activat Clp_N NBD_SMAX1 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AFI89089
UniProt: A0A0H3I052
LinkDB
Position
1073829..1076426
AA seq 865 aa
MIRIELPTLVERLNPVCRHMLEEAAALCIQHQGAEIRIEHLLMKMLETPLCDVRQILKRA
GVDADELSSLLLPSSVDKEFDAGYPSFSPLLVEWLQDSWLLASAEFQHVRLRSGILLLVL
LLTPNRYVAGAVSRPLAQINRELLRQQFDEWVKDSVETDVAVQSATAEQAAAANTQLSRY
TQNVTESARQGQLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRIV
AGAVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKDAPRPIILFIDEAHTLI
GAGNQAGGLDVSNLLKPALARGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNAE
EATVILRGLRGIYEKAHGVLIDEDALQAAAQLSARYISGRQLPDKAIDVLDTASARVAIN
LTTPPRAVSQLQTRLRQQEMEITQLERQARIGLGNTEDRLVELRNAREAGAAQLVQLEAD
WQQQKTQVQRVIELRTALLDEDQAVDFDAVSAAAELADCEQALEALQQSSVLVSPHVDKT
QIAAVIAEWTGVPLNRISQGEMDIVTRLPEFLGETIKGQQLAIAQLHKHLLTARADLRRP
GRPLGAFLLVGPSGVGKTETVVQIADLMFGGRNYLTTINMSEYQEKHTVSRLIGSPPGYV
GFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVIDCRNVVF
FLTSNLGFQTIVNYAEQSDVLLDALYPELAAFFKPALLARMEVIPYLPLAHATMVEIVQG
KLSRLVSLLQQRFSAEVIIEDEVPEEILRLANRSENGARMLESVIDGALLPPVSLQLLQR
LSAGEPVSRIHFRVEAGQFQTEVEG
NT seq 2598 nt   +upstreamnt  +downstreamnt
gtgattcgaattgaactgccgacactggttgaacgactcaaccccgtgtgccgtcatatg
ctggaagaagcggcggcactctgtattcagcatcagggtgcggaaatccgtattgagcac
ttgttgatgaaaatgctggaaacgccgctgtgtgatgtgcggcagatcctcaagcgtgcg
ggcgttgatgcggatgagttgtcttcgctgctgttgccttcctccgtggataaagaattt
gacgcgggctatccctcattctcccctctgctggtggagtggttacaggatagctggctg
ctggcctcggctgagtttcagcacgtgcgtctgcgcagcggcatattgttgctggtcttg
ctgctgacgcccaatcgctatgtggcaggcgcggtgtcccgcccgctggcgcagattaac
cgtgaacttttacgccagcagtttgatgagtgggtgaaagattcggtggaaacggacgtc
gcggtgcagtccgccacggccgaacaggcagccgcggcgaacacgcagctctcgcgctat
acgcaaaatgtgacggaatccgctcgacaagggcagttggacccggtgttgtgccgcgac
catgaaatcgatctgatgatcgatattctctcccgtcgtcgtaaaaacaacccgattgtc
gtgggggaagcgggtgttggtaaaagtgcgctgatcgaagggctggcgctgcgtattgtg
gcgggtgccgtgccggaaagactacgagatgtagaactgcttacgctcgatttgggggcg
atgcaggcgggtgcgtcagttaaaggcgaatttgagaaacgcttcaaaggtgtgatgcag
gaagtgaaggatgcgccacgcccgatcattctatttattgatgaagcgcatacgctaatc
ggggcaggcaatcaggccggtgggctggatgtgtccaatctgcttaagcctgcgctggcg
cgtggtgagctgcgtaccatcgcggcaaccacctggagcgaatacaaaaaatatgtcgag
aaggacgctgcgctttcccgtcgcttccagctcgtcaaagtcggtgaaccgaacgcggaa
gaagccacggtgatcctgcgtgggctgcgcggtatctatgaaaaagcacatggcgtcctg
attgatgaagatgcgcttcaggcggcggcgcaactgtcggcgcgctatatctctggtcgc
caactccccgataaagcgattgacgtgctggataccgcgagtgcgcgcgtagccattaac
ctgacgacaccaccgcgtgccgtcagccagctacagacccgtctacgccagcaggaaatg
gaaatcacccagcttgagcggcaggcgcgcatcggtctgggcaataccgaagaccgctta
gtggaactgcgtaatgctcgcgaagccggcgcggcacagttggtacagttagaagccgat
tggcagcagcagaaaacgcaggttcagcgcgtgattgaactgcgcacggcgttgctggat
gaagatcaagccgtcgatttcgatgctgtgtcggctgcggcggaactggcggactgcgaa
caggcgctggaagcgttgcaacaatcctccgtgctggtctctcctcacgttgataaaaca
cagattgctgccgtgatagctgagtggacgggcgtgccgcttaaccgaatctcgcagggt
gaaatggatatcgtcacgcgcctgcctgaattcctgggtgaaacgattaaaggacagcag
ttggcgattgctcaattgcataaacatttgctgaccgcgcgtgcggatcttcgtcgtcct
gggcgtccgttgggggctttcctgctggtggggccgagcggcgtgggtaaaacggaaacc
gtggtccagattgccgacctgatgtttggcggacgtaactatctgaccaccatcaatatg
tcggaatatcaggagaaacataccgtttcacgcctgatcggttcgccgccgggctacgtc
gggtttggtgaggggggcgtattgaccgaagcgatccgccagaaaccgtattccgtggta
ctgctggatgaagtggaaaaagcacacccggatgtcctgaatctgttctatcaggccttt
gataaaggtgaactggccgacggtgaaggccgggtcatcgactgccgcaatgtggtgttt
ttcctgacgtccaatctcgggttccagacgatcgtgaactacgccgagcagtcggatgtg
ttgctggatgcgctctatcctgagctggcggctttctttaaacctgcactattggcgcgt
atggaagtcatcccttatctgccgctggcgcatgccaccatggtcgagatcgtacagggt
aaattgtcgcgtctggtttctctgctgcaacagcgctttagtgctgaggtcatcattgag
gatgaggtgccggaagaaattctccggttggcaaaccgcagcgaaaacggggcgcgtatg
ctggagtcagtgattgatggggcattgctgccaccggtatcactacaactgctgcaacga
ctgtctgcgggggaacccgtcagccgtattcatttccgcgtcgaagccggccagttccag
accgaggtggagggctga

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