Pectobacterium parmentieri SCC3193: W5S_1086
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Entry
W5S_1086 CDS
T02514
Name
(GenBank) Carbohydrate diacid regulator
KO
K02647
carbohydrate diacid regulator
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_1086
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
Other families
W5S_1086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
CodY
Motif
Other DBs
NCBI-ProteinID:
AFI89193
UniProt:
A0A0H3I3H7
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Position
1186361..1187518
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AA seq
385 aa
AA seq
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MASYHLNAKMAQDIVARTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLVRTDDLSPALMEWAQRLGIDLNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEEHRRRVDTLMSRMAE
SSRLRVRLALGNYFSGPGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLSKLKAMDGNGLLRRTLGAWFRNNVQPGATAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcatctcaatgccaagatggcacaggatattgtcgcgcgaaccatgcag
atcattgatagtaatatcaacgtgatggatgctcgcggtaaaattatcggcagtggcgat
caggaacgattgggggaattgcacgaaggggcgctgttggcgctctcgcaggggcgggtt
gtcgatattgatgatgctgtggcgcgccacctgcacggcgtgcgtccgggtatcaattta
cctttgcgtattgatggcgagattgttggcgttatcggcctgacagggaatcccagccaa
ctgcgacaatacggcgaacttgtctgtatgacagcggaaatgatgctggagcaggcgagg
ctgttgcatatgctggcacaggacagtcgtctgcgcgaagaactggtgttgaacctggtt
cgtaccgacgatttgtctcctgcgctcatggagtgggcgcagcgtttaggcatcgatctg
aataagccccgtgtggccgcagtgatcgaagtggacagcgggcagcttggcgtagactcc
gctatggcagaactacagcagttgcagacgctgctgactacgccggagcgtgacaacctg
atcgcgattgtctctctaacggaaatggtggtactaaaaccggcgctgaacagccacggg
cgttgggatgcagaagagcatcgacgtcgcgtggatacgctgatgtcgcgcatggcagaa
agtagccgactgcgggtgcgactggcgttggggaactatttttctggccccggcagtatc
gcgcggtcttatcgcacggcgcgaacgacaatgagcgtaggcaaacagcgtatgcccgct
caacgttgttattactatcaggatttgatgttgcccgtgctgctggatagtctgcgcggt
ggttggcaggcaaacgaactggtacgcccgctttctaagctcaaggcgatggacggtaat
ggtctgctgcgccggacgctgggtgcctggttccgtaataacgttcaacccggtgcgacg
gcgaaagcgctgtttatccaccgtaatacgctggagtatcgtcttaatcgtatctctgaa
ctgacgggattggatctggggaatttcgacgaccgcctgctgctgtacgtcgctttacaa
ctggatgaagaagagtag
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