Pectobacterium parmentieri SCC3193: W5S_1121
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Entry
W5S_1121 CDS
T02514
Name
(GenBank) GAF/GGDEF domain protein
Organism
pec
Pectobacterium parmentieri SCC3193
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_9
GAF_2
PAS
PAS_3
GAF
PAS_8
PAS_4
DUF2802
PAS_13
PAS_12
Motif
Other DBs
NCBI-ProteinID:
AFI89222
UniProt:
A0A0H3HZG5
LinkDB
All DBs
Position
1217443..1218957
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AA seq
504 aa
AA seq
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MYEIIITLLLLLLLFSSVKNRKIKQKFKTEQKKQDFLNMTFFAMEYSPASIMIADENCEI
IYVNRQFITMSGYMPDEVIGKKTNILNSGMTNASVYEDLWATINKGNVWSGEFVNRRKDG
QLYWEKANIVKIYNKASNTTQYVGIKLDITERKSQEHHDNSYNRALELLSSGAPLKDILD
AIIFSVEEKNPGRIVCSVLLVDKDKKCLTLGSAPSLPGFYKNAIHNVKIADGVASFGTAA
YTGKRVVAEDISVHPHWSLYKGLALYAGLRSCWSEPIIGQNKEILGVLSVYHRKVYAPTE
EEIFSIEKSAQLISIAIERYHAIDMLRRSEEHYRQLAHYDSLTSLANGLTFAEQMEQAIL
LSKQTGRKIALMFLDLDKFKQINDSFGHAVGDLLLKEAAARMRGAVRDSDTVYRRSGDEF
IILLQGIKEIDNTLYVADKIHNALNKPFEINGKTLDISCSIGIALYPEHGSDSLTLAINA
DSAMYQAKAMGRSQTQIYHSMNDH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgaaattataataaccttactgttattgttgctattgttttcttctgtgaagaat
agaaaaattaaacaaaagtttaaaactgagcagaaaaaacaagattttctcaacatgact
ttttttgcaatggaatatagccctgcctcaattatgatcgcagatgaaaattgtgaaatt
atttacgtaaatcgtcagtttattaccatgtctggctatatgccggatgaagtgattgga
aaaaaaacgaatatattaaactcaggcatgaccaatgccagcgtttatgaagacctgtgg
gctaccataaataaaggtaatgtttggagtggtgagttcgttaaccggcgtaaagatggg
caactgtattgggaaaaggccaatattgttaaaatatataataaggcgagtaacacgact
caatatgttggcattaagttagatatcacggagcggaaatcgcaggaacatcatgataat
tcatacaatcgcgcgctagaactgctatcaagcggtgcgccgttaaaagatattctggat
gcgatcattttcagcgttgaagaaaaaaatcctggccgcattgtctgttctgttctgcta
gtcgataaagataagaaatgtctgacgcttggatccgcgccaagcctgccgggtttttat
aaaaatgctattcataatgtaaaaattgccgatggtgtggcctcttttggtaccgccgct
tataccggaaagcgcgtagttgctgaagatatctcagtccatccgcactggtccttatat
aaagggcttgcattatatgccgggctgcgctcctgttggtctgaacctatcatcggccag
aataaagaaatattaggcgttttaagtgtttaccatcgtaaagtctatgcgccgaccgaa
gaagaaattttctctatagagaaatcagcacaactgatttcgattgctatcgagcgatat
catgccattgatatgctgcggcggagcgaggagcactatcggcagttggcacactatgat
tcattaacgtcactggctaatggcctgacattcgccgaacaaatggaacaagcgatcctg
ttatctaaacaaacgggcagaaaaatcgcactgatgttcctcgatctcgataaatttaaa
cagataaacgattcgttcggacatgctgttggtgacttgttattaaaagaagcggcggcg
cgtatgcggggggcggttcgggattcggataccgtatatcgccgtagcggtgatgaattt
attattctgcttcagggcattaaagaaattgataatacactttatgtcgccgataaaatt
cataatgcattgaacaaaccttttgaaatcaatggtaaaacgctggatatatcatgcagt
atcggtattgcgttgtacccagagcacggttctgactctctgacactggcaattaacgcc
gactctgccatgtaccaagctaaagccatgggacgtagtcaaacacagatttatcacagc
atgaatgatcactga
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