Pectobacterium parmentieri SCC3193: W5S_1132
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Entry
W5S_1132 CDS
T02514
Name
(GenBank) Membrane-bound lytic murein transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
W5S_1132
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
W5S_1132
Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
W5S_1132
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AFI89233
UniProt:
A0A0H3I3L9
LinkDB
All DBs
Position
complement(1234395..1235840)
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AA seq
481 aa
AA seq
DB search
MKPLKLNYFFIGIITLLLALALWPSIPWRSSQDVQLRQILSRGELRISTVNSPLTYAMSN
GSPTGLDYELAKRFADYLGVKLVVSSRKNLDELFDDLDGDDADLLAAGLIYNHERLERFR
AGPTYYSISQQMVYRLGSPRPKTLDKLQGRLVVTSGSAHAATLRDLKAEKYPQLSWESAS
DQSTQELLKQVADGKLDYALGDSVTIGLMQRIHPQLAVAFDLSDEEPVTWYMRRSHDDSL
SAALLDFFSKIVEDGTLARLEEKYLGHVGEFDYVDTTTFLGAIDETLPDLRPLFEKYAIN
IDWKLLAAISYQESHWNPLATSPTGVRGLMMLTRNTAESLNVTDRIDPEQSIRGGAQYMS
YMMQKMPDTIPEDEKIWFALASYNMGYAHLLDARKLTEKQKGNPDSWVDVKMRLPMLSQK
RYYTQTTYGYARGQEAYNYVENIRRYMVSLEGYLIEKETKAQQQTQIAQSYPAVPLNKVP
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcctttaaaattaaattattttttcatcgggattatcacgttactactggcgtta
gcgctatggcctagcattccctggcgcagcagtcaggatgtgcagctcaggcagatcctg
tcacgcggcgagttgcgtatcagcaccgttaactcaccgctgacttatgcaatgagcaac
ggatccccgacaggtctggactatgaactggcaaaacgtttcgccgattacctcggcgtc
aagctggtggtttcgtcgcgcaagaaccttgacgaactgttcgacgatctggacggtgac
gatgccgacctactggctgccgggctgatttacaatcacgagcgtctggagcgtttccgt
gctggcccgacctactactccatttcgcagcaaatggtctaccgcctcggttcacctcgt
cccaaaacgctggataagctgcaaggccgcctcgttgtcacatcgggctccgcccatgca
gcgaccctgcgcgatttaaaagcagagaagtacccacagttaagttgggaatccgcctcc
gatcagagcacgcaggaactattgaaacaggttgccgacggcaaactggactatgcgcta
ggtgactccgttaccatcggcctgatgcagcgtattcatccacaactcgccgtcgccttc
gatctcagcgacgaagagcctgtcacctggtatatgcgccgttcgcatgatgatagcctg
tctgctgccttgttggattttttcagcaagattgtcgaagacggtacgctcgcacgtctg
gaggaaaaatatctcggccacgttggtgaatttgattatgtcgataccaccacgtttcta
ggtgcgattgatgaaacactgccagacctgcgcccgctgttcgaaaagtacgccatcaat
atcgactggaagttgctggccgctatctcctatcaggagtcacactggaacccgctggca
acctcccctactggtgtgcgtgggctgatgatgctaacgcgtaacaccgcagaaagcctg
aacgtgaccgatcgcatcgacccagagcagagtattcgcggcggcgcacaatatatgtcg
tatatgatgcaaaaaatgccagacaccattccagaagatgaaaaaatctggtttgcgctg
gcatcctacaacatgggatacgcccatctgcttgatgctcgtaaattgaccgagaaacaa
aaaggcaatcctgacagttgggtagacgtaaaaatgcgtttacccatgctgagccagaag
cgctattacacccaaactacctacggctacgcgcgcgggcaagaagcctataactatgtg
gaaaatattcgacgctatatggtgagtctggaaggttatctgatagaaaaagaaaccaaa
gcgcagcagcaaactcagattgcgcaaagctatccggcggttcctctcaacaaggtgccg
gaataa
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