Pectobacterium parmentieri SCC3193: W5S_1141
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Entry
W5S_1141 CDS
T02514
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00260
Glycine, serine and threonine metabolism
pec00460
Cyanoamino acid metabolism
pec00630
Glyoxylate and dicarboxylate metabolism
pec00670
One carbon pool by folate
pec00680
Methane metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
pec01230
Biosynthesis of amino acids
pec01240
Biosynthesis of cofactors
pec04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
W5S_1141
09102 Energy metabolism
00680 Methane metabolism
W5S_1141
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
W5S_1141
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
W5S_1141
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
W5S_1141
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
W5S_1141
Enzymes [BR:
pec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
W5S_1141
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AFI89242
UniProt:
A0A0H3HZI7
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All DBs
Position
1250039..1251292
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVIPYGIDESGKIDYDEMAELARTHKPKMIVGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAADVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLSRGFNVVSGATSNHLFLLDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAATRRGFKEAEVRELAGWICDVLDNINDEATIERVKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgacctgtggcaagcaatggag
caagaagtggtgcgtcaggaagagcacattgaactgattgcatcagaaaactacaccagc
ccacgcgttatgcaggctcaagggtctcagctaacgaacaagtatgctgaaggttatccg
ggcaaacgttattacggcggctgtgagtatgtggacatcgttgagcaattggcgatcgac
cgtgctaaagcgctgttcggtgccgattatgctaacgtacagccgcactccggttctcag
gctaactttgccgtttataccgcgctgctgcagccgggagacactattctgggtatgaac
ctggcgcacggtggtcacctgacgcacggttctccggttaacctgtccggtaaactgtat
aacgtcatcccttacggcatcgacgaaagcggcaaaatcgactacgacgaaatggctgag
ctggcgcgcacgcacaagccaaaaatgatcgttggtggtttctctgcctactctggcgtg
gttgactgggcgaagatgcgtgaaatcgctgacagcatcggtgcttatctgtttgtggat
atggcgcacgttgcgggtctgattgctgcagatgtttaccctaacccggttcctcatgct
cacattgtgacgacgacaacgcacaaaacgctggctggcccacgcggtggcctgattctg
gcgaaaggtggcgacgaagatctgtataaaaagctgaactccgctgtgttccctggtggt
cagggcggtccgttgatgcacgttatcgcgggtaaagctgtcgcactgaaagaagcgatg
gagcctgagttcaaagtctaccagcagcaagttgcgaaaaacgccaaagcaatggttgaa
gtcttcctgtcacgtggctttaacgtggtttctggtgcaaccagtaaccatctgttcctg
ctggatctggttagcaaaaacctgaccggcaaagaagccgatgctgcgctgggtcgtgcg
aacatcaccgtgaacaaaaacagcgtgcctaacgatccgaagagtccgttcgtgacttcc
ggtatccgtatcggtacgccagcggcaacgcgtcgcggctttaaagaagcggaagtgcgt
gaactggctggctggatctgtgatgtgttggacaacatcaatgatgaagcgaccatcgaa
cgcgtgaagcaaaaagttctggatatctgcgcccgcttcccggtttacgcataa
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