Pectobacterium parmentieri SCC3193: W5S_1200
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Entry
W5S_1200 CDS
T02514
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00290
Valine, leucine and isoleucine biosynthesis
pec00660
C5-Branched dibasic acid metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01210
2-Oxocarboxylic acid metabolism
pec01230
Biosynthesis of amino acids
Module
pec_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
W5S_1200
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
W5S_1200
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
W5S_1200
4.2.1.35 (R)-2-methylmalate dehydratase
W5S_1200
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Gene cluster
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Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
AFI89301
UniProt:
A0A0H3I5T0
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All DBs
Position
1309653..1311071
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AA seq
472 aa
AA seq
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MNLSKTLYDKHIDSHTIKKFDNEGNVLLYIDRSILNEYTSPQAFSGLRENDRMVWNPKSI
LLNVDHVNPTRPSRDLLMTDPGGTLQVNYFRENSQHFDIELFDVMDKRQGIEHVVAHEQG
LAMPGMVIAAGDSHTTTYGALGAFGFGIGTSEIEHLLATQTLVYKKLKNMRVTLEGTLGL
GVTSKDVIMAVIAHIGADGATGYAIEFCGSVIDNLSVEARMTICNMAVEAGARGAFMSPD
DKVFAYLKATPRAPQGEMWDKAVTNWRQLRSDPDATFDKEIFIECSTVEPFVTWGISPDQ
AGAISSSVPDPEIISDEQKRKDYFTALKYMDLKPGTPFTEIKISHAFIGSCTNSRIEDLR
EVAKVVQGKKLASHVRGMIVPGSSLVRERAEQEGLAQIFIDAGFEWRQSGCSMCLAMNED
VLSPGDRCASSTNRNFAGRQGAGSRTHLMSPAMVAASAIAGHLIDVRYFTGV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgagtaaaacgctatatgacaaacatattgattcacacacaattaaaaagttc
gataatgaaggcaatgttcttttatatatagatcgttcaattttgaatgaatataccagc
ccgcaagcatttagtggattgcgtgaaaatgaccgtatggtctggaatccaaaatctatt
ctgcttaacgtagatcatgtaaacccgactcgtccatcacgcgatctgctcatgacagac
cctggtggtacgttgcaggttaactacttcagggagaacagccagcactttgatattgaa
ttattcgatgtcatggataaacgccagggtattgaacatgtggtcgcgcacgagcagggt
cttgccatgcccggaatggttatcgctgcaggagacagccacaccacgacttatggagca
ctgggcgcgtttggcttcggcattggaacctccgaaattgaacacctcttggcaacgcag
accttggtatataaaaaactcaagaatatgcgcgtcaccctggaaggtactctcggtctg
ggggtcacttcaaaagatgtcattatggcggttattgcacatattggcgcagacggtgct
accggttatgccattgaattttgtggaagtgtcatcgataacctgagcgttgaagcacgc
atgactatctgcaatatggccgtagaagccggtgcgagaggggcatttatgtcaccggac
gacaaggtatttgcgtatctgaaagctaccccacgtgccccgcagggcgagatgtgggat
aaagcggttaccaactggcggcagttgcgtagcgatcctgatgcaacattcgataaagag
atttttatcgaatgctctaccgtagaaccttttgttacctggggaattagccccgatcag
gctggtgccatcagtagttccgttcccgatccagaaattatctcagacgagcaaaagaga
aaagattatttcactgccttgaaatacatggatctaaaaccaggaacgcctttcactgaa
attaaaatttcccacgctttcattgggtcgtgtaccaacagccgtattgaggatttacgc
gaagttgcaaaagttgttcagggtaaaaagttggcttcacacgtgcgcggcatgattgtc
cctggctcctcccttgttcgtgagcgagcggaacaagaaggtttggctcaaatctttatt
gatgctggttttgaatggcgccagtctggttgctccatgtgtctggccatgaacgaagat
gttctgtccccaggagatcgctgtgcctcaagtaccaaccgcaattttgccggtagacag
ggtgccggttcacgtacacaccttatgagtccggcaatggttgcagcctctgcaatcgct
ggtcatttaatcgatgttcgctattttaccggggtttaa
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