Pectobacterium parmentieri SCC3193: W5S_1217
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Entry
W5S_1217 CDS
T02514
Name
(GenBank) Multidrug resistance protein mdtB
KO
K07788
multidrug efflux pump
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W5S_1217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_1217
Transporters [BR:
pec02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
W5S_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AFI89318
UniProt:
A0A0H3I3W2
LinkDB
All DBs
Position
complement(1329773..1332895)
Genome browser
AA seq
1040 aa
AA seq
DB search
MQDTVPASGGGPSRLFILRPVATTLLMFAILLAGIIGYRALPVSALPEVDYPTIQVVTLY
PGASPDVVTSAITAPLERQFGQMSGLKQMSTQSAGGASVITLQFQLELSLDVAEQDVQAA
INAASNLLPSDLPYPPTYSKVNPADPPIMTLAVTSTAMSMTQVQDMVDNRIAQKISQVAG
VGLVSLAGGQRPAVRVRLNAPALAAYGLTSETIRTAITAANVNSAKGSLDGPTRSVTLSA
NDQMKSVDDYRKLIVAWKNGAPVRLQDVATIEQAAENIHLGAWANRQQAIIINVQRQPGA
NVITTTDSINKMLPALKASLPNAVEVTTLTDRTTSIRASVKDVQFELLLAIALVVMVIYL
FLRNAVATLIPSIAVPLSLVGTFAAMYFLGFSINNLTLMALTIATGFVVDDAIVVIENIS
RYIEKGEKPLNAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVSI
LISAVVSLTLTPMMCARMLSHQSLSKQNRFTRASERFFTRLITVYGIWLRKVLNHPWLTL
SVALGTLLLTILLYIWIPKGFFPIQDNSIIQGTVQAPQTVSFSNMADRQQRVVSIIMKDP
AVESISSYVGVDGTNAALNSGRLQINLKPLSERSERIQAIISRLQQQTAQIPGIQLYLQP
VQDLTIDTQISRTQYQFTLQAMSLDELSVWVPKLMTELKKLPQLEDVSSDWQDGAAVAYV
NVDRDSASRLGITMSQVDSALYNAFGQRLVSTIYTQASQYRVVLEHDTTNNTGLDALNDV
RLISSDGGTIPLSSIATIEERQGPLAINHIDQFPSTTISFNVASGYALGEAVDAITQAEQ
QMNLPADITTRFQGSTLAFQSALSSTVWLIIAAIVAMYIVLGVLYESFIHPITILSTLPT
AGVGALLALMMAGNELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMTPYDAIYQA
CLLRFRPILMTTMAALLSALPLMLSTGVGAELRQPLGVCMVGGLIMSQILTLFTTPVIYL
LFDRLAARFRRAPHQEEETE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaccgttccagccagcggaggcgggccgtcacgcctgtttattctgcgcccc
gtcgcaacgacgctgttgatgttcgccattctgttggccggtattattggctatcgggca
ctgcccgtttcagcgctgcccgaggttgattatccgacgattcaggttgttaccttgtat
cctggagccagccccgacgtggtgacctcggcgattaccgcgccgctggaacggcagttc
ggccagatgtccgggctaaaacagatgtcgacgcagagtgcaggcggcgcatccgtcatc
acgcttcaattccagcttgagctgtcgctggacgtcgcggagcaggatgtgcaggctgcc
attaatgcggccagcaatctgttgccaagcgatctgccctatccacccacttacagcaaa
gtgaacccggctgacccgcccattatgacgctggccgtcacctccaccgcgatgtcgatg
acgcaggtgcaggacatggtggacaaccggatcgcacaaaaaatttcgcaggtcgcgggt
gtcgggctggtgtcattagctggcggccagcgaccagccgtgcgggtaaggctaaacgcg
ccggcgctggcggcttacggtctgaccagcgaaactattcgcaccgcgattaccgccgcc
aacgtgaattccgccaaagggagtctggatggtccgacgcgttcggtgacgctctccgcc
aacgaccagatgaaatctgttgatgattaccgcaagctgattgttgcgtggaaaaacggc
gcgccagtaaggcttcaggatgtcgccacgattgagcaggccgccgagaatattcatctc
ggtgcctgggcgaatcggcagcaggcgatcattatcaacgttcagcgccagccaggtgct
aacgttatcacgacgacggacagcattaacaagatgctgcccgcgttaaaagccagcctg
ccgaatgccgtcgaggtcactacgctgactgaccgcaccaccagtattcgcgcctcagta
aaagacgtccagttcgagttactgctggcgatcgcgctggtcgtgatggtgatttacctg
ttcttgcgtaacgccgtcgccacgctgatcccaagcattgccgtgccgctatcactggtt
ggcacctttgccgccatgtatttcctcggtttttccatcaataacctgacgttaatggca
ctcaccatcgccacgggtttcgtggtagatgatgccatcgtggtgatcgaaaatatctcc
cggtatatcgaaaaaggggaaaagccgcttaacgcggcgctgaaaggagcgggagaaatc
ggcttcaccatcatttctctgaccttctcactcatcgccgtgctgatcccactgctgttt
atgggtgatatcgtcggacgcttgttccgcgagtttgccgtcacgctagcagtgtcgatc
ctgatttccgccgtcgtgtcgctcacgctgacgccgatgatgtgtgcccgcatgctgagc
catcagtcgctgagtaaacagaaccgttttacccgtgccagtgaacgtttcttcactcgc
ctgattactgtctacggcatctggttacgcaaagtactgaatcatccgtggctgacgctg
agcgtcgcgctcggtacgctgctactcactatcctgctctatatctggatcccgaaaggc
ttcttcccgatacaagataacagcatcattcagggcaccgtacaggcaccgcagacggtc
tcattcagcaatatggctgaccgccaacagcgcgtcgtgtctattatcatgaaggaccct
gcggtagagagcatttcctcatacgtcggcgtcgatggcacgaatgccgcgctgaacagc
ggtcgactgcaaatcaacctgaaaccgctcagtgaacgcagtgagcgtattcaggcgatc
atcagtcgcctgcaacagcaaacggctcagattcccggcattcagttgtatctgcaaccg
gtgcaggatctcaccatcgacacccagattagccgcacgcaatatcagtttacgttacaa
gcgatgtcgctggatgaactgagcgtttgggtgccgaagctgatgactgaactgaaaaag
ctgccgcagctagaggatgtcagcagcgactggcaagacggtgctgcagtcgcctacgtc
aacgtcgatcgcgacagtgccagccgtttgggcatcaccatgtctcaggtcgatagcgcg
ctgtataacgcttttggccaacgtctggtttccaccatctatacgcaggccagccaatac
cgcgtggtgctggaacacgatacgaccaacaataccggtctggacgcgttgaacgacgtg
cgcctcatcagcagcgacggcggtacgatcccactcagcagcatcgccacgattgaagag
cgtcagggaccgctggcgatcaaccatatcgaccagttcccctcgacgacgatctctttc
aacgtcgccagcggctacgcactaggcgaagcggttgatgccatcacgcaggccgaacaa
cagatgaatctgcctgcggatatcactacccgttttcaaggcagtacgctggcgttccag
tcggcgctgagcagcaccgtgtggctcatcattgcggcgattgtcgcgatgtacattgtg
ctcggcgtgctgtacgaaagctttattcatccgatcaccatcttatctacgctgccaacg
gcgggtgtcggcgcgctgctggcactgatgatggcggggaatgagctggatgtgattgcc
attatcgggatcatcttgctcatcgggatcgtgaagaaaaacgccatcatgatgatcgac
ttcgcgctagctgcggagcgagaacaggggatgacaccgtatgacgccatttatcaggcc
tgtctgctgcgttttcgaccgattctgatgaccacgatggccgccctactcagtgcgcta
ccgctaatgctgagcaccggcgtcggcgcggaactgcgccaaccgctaggggtctgtatg
gtcggtggcctgatcatgagccagattctgacgctgtttacgacaccagtaatttacctg
ctgtttgaccgtctggcagcgcgcttccgtcgtgcaccgcatcaggaggaagaaaccgag
tga
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