Pectobacterium parmentieri SCC3193: W5S_1223
Help
Entry
W5S_1223 CDS
T02514
Name
(GenBank) Beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
W5S_1223
Enzymes [BR:
pec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
W5S_1223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_42C
DUF4434
Glyco_hydro_14
Glyco_hydro_2_C
Cytotoxic
Motif
Other DBs
NCBI-ProteinID:
AFI89324
UniProt:
A0A0H3I1S9
LinkDB
All DBs
Position
complement(1339366..1341426)
Genome browser
AA seq
686 aa
AA seq
DB search
MFKFPPLSSKVPVLLHGADYNPDQWLDNPEVLEKDIEMMKQTQCNVMSVGIFSWSGIEPE
EGRYEFGWLDGILDILHANGIFVFLATPSGARPAWLSQKYPDVLRVGSNRVRALHGGRHN
HCLSSPNYREKVKQMNTQLAKRYSHHPAVIGWHISNEYSGECHCDTCRSTFQSWLKARYG
TLEALNKAWWSTFWSHTYTDWSQLEPPSPIGEVSIHGLNLDWKRFNTSQVSDFCAAEIAP
LKAENPSLPTTTNFMEYFYDYDYWQLAKVIDFISWDSYPLWHNAEDDCTLGAYTAMYHDL
MRTLKGGKPFYLMESTPSLTNWQPISKLKKPGMHILSSLQAVAHGSDSVQYFQWRKSRGS
VEKFHGAVVDHVGHIDTRVGREVQELGDILNKLAPVAGSRVDAKVAIIFDWESRWAMDNA
QGPRNAGLFYEKTVTDHYRTFWEQGVAVDIINADVDLSGYQVVIAPMLYMVRDGFAERVD
AFVKQGGRFVTTYWSGVVNDTDLCYQNGFPGPLRPIMGIWAEEIDGLYDHESNSISGLTG
NEQRLTGPYQVTHLCELIHLEGARALATYDSDFYAGRPAVTVNDYGKGQAYYIASRNDLA
FQRDFFTTLIQTLDLPRALPIDLPYGIVAHRRDDGESEFIFVQNYTATPQHITLPAVYEE
MTTGSTLSGALDLSGYGCRILRRALQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattccccccattaagcagcaaggtgcctgttctgctgcacggtgcagactat
aatccagaccaatggctggacaacccagaggtattggaaaaagacatcgagatgatgaag
cagacccagtgcaacgtcatgtccgtgggcatttttagctggtccgggattgagccggaa
gaaggtcgctacgaatttggctggctggatggcatcctcgacattctgcatgccaatggg
atcttcgtttttctggcaacgcccagcggtgctcgcccggcctggctctcgcagaaatac
ccggacgtgttgcgtgtgggtagcaatcgcgtgcgggcgctgcacggcggtcgtcacaac
cactgcctgagttcgccgaattatcgcgaaaaagtaaaacaaatgaacacccagttggca
aaacgctactcgcaccatcctgcggtgatcggctggcatatttccaacgaatacagcggc
gagtgccattgtgatacctgtcgcagcaccttccaaagctggttgaaagcccgctacggc
acgttagaggcgctgaataaagcgtggtggagcaccttctggagccacacctacaccgac
tggtcgcagttagaaccaccgtcacccatcggtgaagtctccattcacggcctgaatctg
gactggaaacgttttaacacctcacaggtcagtgatttttgtgccgccgaaattgcgccg
ctaaaagccgaaaatccgtcactgccaaccacgacgaacttcatggaatatttctatgat
tacgactactggcagttggcgaaggtgatcgatttcatctcctgggacagctacccgctg
tggcataacgcggaagatgactgcacgctgggtgcttacaccgcgatgtatcacgacctg
atgcgcacgctgaaaggtggcaagcccttctacctgatggaatcaacgccgagcctgacc
aactggcagccgatcagcaaactgaaaaagccgggtatgcacatcctgtcttcgcttcag
gccgtcgcgcacgggtcagactccgtgcagtatttccagtggcgtaagagccgcggttcc
gtcgagaaattccacggtgccgtcgtcgatcatgtcgggcatatcgacacccgtgtcggg
cgcgaagtacaggagttgggtgacatactcaataaactcgcccctgtcgcaggcagcagg
gtcgatgcgaaagtcgccatcattttcgactgggaaagccgctgggcgatggataatgct
caagggccgcgcaatgcggggctgttctatgaaaaaaccgtcaccgatcactatcggacg
ttctgggaacagggcgtggcggtggacatcattaacgccgatgtcgacctcagcggttat
caggttgtgattgcaccgatgctctacatggtgcgcgatggttttgccgaacgcgtcgat
gctttcgtcaaacaaggtggccgcttcgtcactacctactggtctggtgtcgttaacgac
accgatctgtgctaccaaaacggtttccccggtccgctgcgccctatcatgggaatttgg
gcggaagaaatcgacggactgtacgatcatgaaagcaacagtatcagcggtctgacaggg
aatgaacaacgtctgaccggcccgtatcaggtcactcacctgtgcgaactgattcatctg
gaaggcgcacgggcactagcgacctatgacagcgatttctatgccggacgcccagccgtg
acggtcaatgattacggcaaaggacaggcgtactacatcgcatcgcgcaacgatctcgcc
ttccagcgggatttcttcaccacgctgatacaaacgctggatctaccgcgcgcgctgcca
atcgatctgccttacggcattgtcgctcatcgtcgtgatgacggggaaagcgagtttatc
ttcgtacagaactacacggcaacgccgcagcacattacgctgcctgccgtttacgaggaa
atgacgacaggcagcacgctttcaggggcactcgacctgtcaggctatggctgccggatc
ctacgccgcgcattacagtaa
DBGET
integrated database retrieval system
