Pectobacterium parmentieri SCC3193: W5S_1254
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Entry
W5S_1254 CDS
T02514
Name
(GenBank) Diguanylate cyclase
Organism
pec
Pectobacterium parmentieri SCC3193
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1_like
dCache_1
DUF2818
DUF1430
PgpA
Motif
Other DBs
NCBI-ProteinID:
AFI89355
UniProt:
A0A0H3I0Y5
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Position
complement(1376758..1378305)
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AA seq
515 aa
AA seq
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MRVSTHNKNNYYHMPLQRLMLIFILFIITTVVALNGWTVFNSHQQLIDSTERNAKNLSLS
LARHAEDTFLQVDILLQDLQERIDKDGLSPTQIIRLGDILKNRKTTLPQLHGILIYDERG
EWLVSSAGTKPTNANNADREYFRYHQNNVNKDMYIGSVITSRSTGDLIIPVSMRISKPDG
SFNGVLLATLSLNYFKQYYGYYSMGNMDVLAILLSDGRILYGRPYDDSYINRNVSSGPLF
SEYLRQSESGTATFVSTLDHIERIYGYTKLKRYPIVIAAGFDLELVLSKWRTDSWVYAAI
TLILLLTMTLLGLIVLRQIRMNLKNQIDLTIVRDELTSVNHTLQTLALFDGLTGLANRRQ
FDIFLQQTLSRVAGTQQRMALIMIDIDAFKKYNDHYGHVAGDECLRKIGHVLSNMPKRKE
DLVARYGGEEFAIIITDTDKQGVITLAQRVLDAVREEKIPHEMTLFPEKIVTISAGAYVF
CVDNPLPAATSIIDIADAALYRAKNGGKNRFEVSE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcagcacgcacaacaaaaacaattactatcacatgccactccaaagattgatg
cttatctttatactattcatcatcacaaccgtagtggcactgaacgggtggacggtattc
aactctcaccaacagcttatcgattccacagagcgaaacgccaaaaatctgtcgttgtcc
ttggcacgccatgccgaagatacctttctacaagtcgatatcttgttacaggatttgcaa
gaacgcatcgataaagatggtttatcaccaacgcaaataatcaggctcggcgatatttta
aaaaacaggaaaaccacgctgccacaactgcacggaatccttatctacgatgagaggggt
gaatggctggtaagctcggcgggaactaaacccaccaatgcgaataacgctgacagagaa
tattttagatatcaccaaaacaacgtcaacaaagacatgtacatcggcagcgtaattact
agtcgctctaccggcgatctgatcattccggtttctatgcgtatcagtaaaccagacggc
agctttaacggcgtgctgctcgccaccctctcgctgaactatttcaaacagtattatggc
tactactccatggggaatatggacgtactcgccattctactttccgatggccgaattctg
tacggccgcccttacgacgattcgtatatcaatcgaaatgtgtcaagtggcccactcttt
tcagaatatctgcgacagtccgaaagcgggaccgcgacgtttgtctcgacgctcgaccat
atcgaacgtatttatggctacacaaaattaaagcgttaccccatcgtcattgccgcaggt
ttcgatcttgaattggttctcagtaaatggcgaacggacagttgggtctacgctgccatt
acgctcattttgctgctcacgatgaccctgctcggcctgatcgtactgcggcaaatccgt
atgaatttaaaaaatcagatcgatttaaccatcgtgcgtgatgagctcacatcggttaac
cataccctgcaaacgctggcgctgtttgatggcctgacaggcttggctaaccgccgccag
tttgatattttcctgcagcaaaccctctcgcgagttgccggtacgcagcagcgcatggcg
ttgatcatgatcgacattgatgccttcaagaaatataacgaccattatgggcatgtggct
ggcgatgagtgtctgcgcaagattggccacgtcctgagcaacatgccgaagcgtaaagaa
gatttagtcgcccgttatggcggcgaggaattcgctatcatcatcaccgataccgataag
caaggtgtcatcacgctcgctcagcgcgtactggatgcagtgcgggaggaaaagatcccc
catgaaatgactttgtttccagaaaaaatcgtcaccattagcgccggagcctacgtgttc
tgcgtcgataacccactgccagcggcaacatctattatcgatattgccgatgccgcattg
tatcgcgccaaaaatggcggcaaaaatcggttcgaagtcagtgaatag
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