Pectobacterium parmentieri SCC3193: W5S_1349
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Entry
W5S_1349 CDS
T02514
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_1349
Enzymes [BR:
pec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
W5S_1349
Transfer RNA biogenesis [BR:
pec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W5S_1349
Prokaryotic type
W5S_1349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFI89448
UniProt:
A0A0H3I461
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All DBs
Position
1480074..1480925
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AA seq
283 aa
AA seq
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MSETTQAAAIQATAVAENERASLKIALGIEYDGSQYYGWQRQNDVASVQACLEKALSKVA
DEPIEVFCAGRTDAGVHGTGQVVHFTTQAIRKDAAWTMGVNANLPPDIAVRWVKTVDEDF
HARFSATARRYRYVIYNHRYRPAVLSHGMTHFYHPLDVERMERAGQCLLGENDFTSFRAV
QCQSRTPWRNVNHLKVTRHGDYIVVDIKANAFVHHMVRNIVGSLMDVGCGNRPESWIAEL
LVAKDRTLAGATARAEGLYLVAVDYPTRFALPQPTMGPLFLAD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaccactcaggcggcggctattcaagccaccgccgttgcggaaaacgaacgt
gcttcgctgaaaattgcgctaggcattgagtatgacggtagccagtattatggctggcag
cgtcagaatgatgtcgctagcgtacaggcctgtcttgaaaaggcgctgagcaaagtcgcg
gatgaaccgatagaagtgttttgtgccggaagaaccgatgccggggttcacggcactggg
caggtcgtgcatttcaccacgcaggcgatcagaaaagatgccgcctggacgatgggcgtg
aatgcgaatttaccgccggacattgccgtgcgctgggtgaaaacggtagatgaagatttc
catgcacgctttagcgcaacagcacgtcgctaccgttatgttatctataatcaccgctat
cgccctgcggtgctctcgcacggtatgacgcatttttatcatccgctagatgtggaacgg
atggaacgcgccggacagtgtctgctgggggaaaatgatttcacctcttttcgtgcggtt
cagtgccagtcgcgcacgccgtggcgcaatgtaaatcatttaaaggttacacgtcacggt
gactatatcgtggtagatattaaggccaatgcattcgtccaccatatggtgcgcaacatc
gttggtagcctgatggacgtcgggtgtggcaatcgtcccgaatcgtggattgcagaactg
ctggtagccaaagatcgcacgttggcaggcgcaacggcccgagcagaagggctgtacttg
gtggcggtagattacccgacgcgctttgctttgccgcagcctacgatggggccgctcttt
ttagcagattga
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