Pectobacterium parmentieri SCC3193: W5S_1604
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Entry
W5S_1604 CDS
T02514
Name
(GenBank) Helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
W5S_1604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AFI89696
UniProt:
A0A0H3I6Z0
LinkDB
All DBs
Position
1751412..1756565
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AA seq
1717 aa
AA seq
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MSQKKKKRVASKVAELREYLQFAEKTHKEAVHQGNLDKDDNLQFNFPRPGGGEVLSRWEM
QKMPPDILITNTSMLSTMLVREIDDPIFDQTHQWIEHDPNAYFYLVLDELHLQRGTAGTE
VSYLLKHLINRLGLDQPQHRHKLRILASSASLPVSGQQGNQSIDYLWGMFGQRGLPMNAS
AKDWKTCIVDGKLEELVEIPHFCGDPPAFCQAVEKLKSTEASAIWCDIARSLRCYREGVA
IEELAQHSVLLATRMLEKGCIDENKSLRATAINSLATDLFGEHPDARRGVSALIWIRTTV
DSWQQWFAHPFPAHIVLPRFRAHAFLRALEGLYVAPLPSPPQADKDEINQWLFADLTVES
GLRYGDRLYGDKQRSRRVELLYCECCATLFLGGKPSAFSATSNRTELLPNDPDTEKLPEH
AKSVMIERRSAEEYVLFMPTVDRFWPLGNEKLTDDDSFGKWREASYDPFTATITQPRSLV
KPLLETEIAGWFYSVPSGDFIPPKRDQSSSKSPGSSLPFQCPACGTSYKYGKGKLSPIRG
FRVGFAKTTQLLASTLMAELQKSGDQERLVTFSDSRQDAAKAALDLESGHHDDIRREILI
GSLKELAADKCSHEKLRIRFDEVIKRKKELDILDDLNKLSDAQEKELDDLWKERKHIKET
LLLPQADSVSLEAILENSPKAGEPLNKLLAKLVKAGIHPTDRTGITPVPDPSKHSEDIKT
FTWQQLFDKNYQNKWCWKAFPYYESDLDIARQEISRDLKELAGESVFSKTYFALEEAGWG
YPCIPISESYSREKLAIFDALLRVLADAYRVEPSQYRNPDNPNTPWGAASAIPKRNRVYR
FANSICQQSGGSVLGLLDEFLLLLEKAGHPGGIIDIGKVHFHLVEPADSFWRCSKCGRVH
LHLGAKICTRCHAVLPEIQYGEAGVLQKQNYLGKRILHSSGNHRMRSEELTGMTENPAAR
LRRFKGILIADDDDILPTGLKNFEPDTDLDRKARVIDVLSVTTTMEVGVDIGDLRAVFQA
NMPPQRFNYQQRVGRAGRRGQAFAFVLTACRSKSHDLFYFRHPEKITGDLPPPPFLTTKL
EMICQRLVRKVWLVAAFKWLRQNAINSHQLWPVDEHRQKPDNHGEFFQVDWLKDYRIDWL
PRIRNALTATMRDRDEFAHVCMPDDQSFYHSIVQLLTPDKLIQDIDAALNDDAMAGKGLA
EALAERGQFPMYGMPTRTRLLQTRAIATGEDDIQFASMDRDLDIAIQEFAPGKYLVQDKR
RYLTAGYAGMLRQRYHKSIEFDSNVNGLGESRTMTACPVCRVWTPINHTIPECTACGAEI
DDVEQYQCYVPYGFITSLEDKSVKEDLDQTLTNASRVSIAEAYSFSSGAEFDTNVAIQLE
SQICLHRLNRGIYADERWSGFNALQGNLRVPFRKEGVYQSLTANRVWVDSQLLETDPLLK
RRFTSLSESRTSFYLAAPKVTDLLALMVVNTPVGLQLQTQAFRAAALSAAFIIVNYASKE
LLDIDPEEIEILEPRVQRLADGRLAPILQMADRLVNGSGLCERLQQKGTSGTPIILEVMK
AIVSNKNGFPLKEFLDNEHPKKCIQACYHCLHRYGNQAYHGLLDWRLGLDVIQLLLNKNY
DAGLNGDFSAPGIADWRENAVSLAKEAASLFNSEVRMVGHIPLINIGPERWVAVTHPFWS
VDGVFTANPELERLFLEWQLERKMISTFDLSRRMGLL
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaagaagaaaaaacgtgtcgcaagtaaagtcgctgaattgcgtgaatatctg
caatttgctgaaaagacccataaagaggctgtgcatcaaggaaacctcgataaggatgat
aatttacagttcaatttccccaggccaggtggaggcgaagtgcttagccgctgggaaatg
caaaagatgccgccagatattctcattaccaacaccagcatgctttcaactatgctggtg
cgtgaaattgacgatcctatttttgatcagacccaccaatggattgaacatgatccgaac
gcctacttttaccttgtgctcgatgaactgcatctccagcgcggcacggcaggcactgaa
gtcagctatttgcttaaacatttgatcaaccgtttgggattagatcaaccacaacatcga
cacaaattacgaattctggcttcgagtgcttcactccccgtgagtggtcagcagggtaat
caaagtattgactatctatggggcatgtttggtcaacgcggattaccaatgaatgccagc
gcgaaggactggaagacttgcattgttgatggaaaactcgaggaactggttgagataccg
catttttgtggagatccccctgcgttttgtcaggctgttgagaaactaaagtcaactgaa
gcatctgccatatggtgtgacatcgctcgtagtctgagatgctatcgcgaaggtgttgct
atagaagaattggcgcagcattcggtcttattggctaccagaatgctggaaaaaggatgt
atcgacgaaaacaaatctctacgcgcaaccgctatcaactcacttgcaaccgatctattt
ggagaacatcccgatgcgcgtaggggagttagtgcgctaatctggatacggacgacggtt
gatagttggcaacagtggtttgcacatccttttcctgctcatatcgtactaccacgtttc
cgggctcacgcatttttacgcgcattggaaggtttgtatgttgctccgctgccatcccca
ccacaagcagataaagatgaaataaaccaatggttattcgctgatcttacggttgaatct
ggtctacgctacggcgatcgtttgtatggagataagcagcgttcgcgacgcgtggaactg
ctttattgtgaatgttgtgcaacattatttttgggcggaaaaccatctgctttctcagcg
acaagtaaccggacagaactactaccaaacgatcctgacacagagaaactcccggagcac
gcaaaatcagtgatgattgagcgacgttcagcggaagaatatgtcttattcatgccaacc
gttgatcggttctggcctctcggtaatgaaaaactcacagatgacgattcttttggtaaa
tggagggaggcaagttacgatccgtttaccgcaacgattactcagccaagatctttagta
aaacctttactggaaaccgagattgcaggctggttttatagtgttccttcgggtgatttt
atccctccgaaaagagatcagtcatccagtaaatcgccaggttcttcattgcctttccaa
tgtccagcatgtggaacctcatataaatatggtaaaggaaaactgtcgcctattcgtggt
tttcgagtgggtttcgcgaaaaccacgcagctccttgccagtacattaatggcagaattg
cagaaatcaggagatcaagaacggctggtgacattctctgatagtcgacaagatgcggct
aaggcggcgcttgatcttgaatccgggcatcatgatgatatcaggagggagatcctcatc
ggttcgctgaaagaacttgcagcggataaatgttctcatgaaaaattgcgtatacgtttc
gatgaggttataaaaaggaagaaagaacttgatattcttgatgatcttaacaaactttca
gatgcacaggaaaaagaattagacgatctttggaaagaacgaaaacatatcaaagaaacg
ttattactcccacaggctgatagtgtctcgctagaagcgatattggaaaattcgcccaaa
gcgggagagccacttaataaattactggctaaattggttaaagccggtattcatccaacg
gaccggacgggcattactccggtacccgatccatcaaaacatagcgaagatattaaaact
tttacatggcaacagctctttgataaaaactatcaaaataaatggtgctggaaggctttt
ccttattacgaaagtgatctggatattgcccgccaggaaatttcacgcgacctgaaagaa
ctagccggtgaaagcgtcttcagtaaaacttactttgcattggaagaagctggatggggg
tatccctgtatccctatttccgagagttattcccgggaaaaattggcaatatttgatgca
ttacttcgagttttagcggacgcttatcgagtcgagccatcgcagtatcgtaatcccgac
aaccctaacacaccttggggggcggcatcagctattcctaaacgcaatagggtatatcgc
tttgcaaattcaatatgtcaacagtctggcggtagtgttttaggcttacttgatgaattt
cttctgttacttgaaaaagcaggtcatccaggtggcatcattgatattggaaaagtgcat
ttccatttagttgaacctgccgatagcttctggcgttgcagcaagtgcggtcgcgttcac
ttacatctgggggcaaaaatatgcacccgctgtcatgctgttttacccgaaatacaatac
ggtgaagcaggtgtacttcaaaaacaaaactaccttggtaagcgtattttacattcatcc
ggcaaccatcgaatgcgttctgaggagctcactgggatgacagaaaacccagcggcaaga
ttacgtcgcttcaaaggtattctgattgcggatgatgatgatattttaccaacgggactg
aaaaactttgaaccagacactgacctggatagaaaggcacgcgttattgacgtactttct
gtcaccaccaccatggaagttggcgttgatattggcgatttacgtgctgtatttcaggcc
aacatgccaccacagcggtttaactaccagcagcgtgttggtcgtgctggacgacgtggg
caggcttttgctttcgttctgaccgcatgtcgtagcaaaagccatgatctgttttacttc
cgccatccggaaaaaataactggcgaccttccacctccacctttcttaactaccaagctg
gaaatgatctgccagaggctggtacgcaaagtctggttggtggctgcgttcaaatggtta
agacagaacgcaattaattcacaccagttatggcctgtggatgaacacaggcaaaaaccc
gataaccacggcgagttttttcaagttgactggctaaaagattatcggatcgactggcta
ccgcgtattcgtaacgcattaacagcaacgatgagagatcgtgatgaatttgcccatgtc
tgtatgccggatgatcaatccttctatcatagtattgtacaattactaacccccgataag
ctgatacaagatattgatgcagcgttaaacgacgatgcgatggcaggtaaagggttggca
gaggcattggctgagcgagggcaattcccgatgtatggtatgccaactcgcacgcgtctg
ttacagaccagagctattgctacaggcgaagatgatatccagtttgctagcatggatcgt
gatctggacattgcaatacaagagtttgcaccgggaaaatatctggtacaagacaaacga
cgctacttaacagcaggctatgctgggatgcttaggcagcgctatcataaatcgatagag
tttgattccaacgtgaatgggctgggagaaagccgaacgatgactgcctgtccagtgtgt
cgtgtctggaccccaatcaatcatacgatccctgaatgtacagcatgcggtgcagagata
gatgatgttgagcagtatcaatgttatgtaccttatgggtttattacctcactggaagat
aaatcagttaaagaggatctcgatcaaaccctgactaatgccagccgagtttctattgct
gaggcttactcattttcatctggggcagagtttgatactaacgtagccattcaacttgaa
tctcaaatctgtcttcatcgccttaatcgtggcatatatgccgatgaacggtggagcggt
ttcaatgcgctacagggaaatttacgagttccctttagaaaagagggggtgtatcagtca
ttaacggcaaatcgcgtttgggtagatagccaattacttgagactgatcctttattgaaa
agacggttcacatctttgtcggaaagtagaacttctttttatcttgccgcccctaaagta
acggatttgttggctctgatggttgttaacacccccgttggccttcagctacagacgcag
gcattccgggccgcagcgctctctgctgcatttattattgttaactatgcttcaaaagag
ttgcttgatattgatcctgaagaaatcgaaattctggagccgcgagtccaacgattagcg
gacggaaggctggcaccgatactgcaaatggccgatcgtctggttaatggttccggatta
tgtgagcgcctacaacagaaaggaacatccggtacgccgatcattcttgaggtaatgaaa
gctattgtcagcaacaaaaatggcttcccgctaaaagagtttctggacaatgaacatccg
aaaaaatgtattcaggcgtgttatcactgcctgcatcgatatggtaatcaggcttatcac
gggttgcttgactggcgacttgggctggatgttatccaactgctactgaataaaaattat
gatgctggattgaatggcgatttctctgctcctggtatcgctgactggcgagaaaatgcc
gtgagtttagccaaagaggcggcgtcactctttaatagtgaagttagaatggtaggccat
attccgctgattaacattggtccagaacgctgggttgcggtgacccatccattctggagc
gtggatggcgtttttacggctaaccctgagcttgaaaggctattccttgagtggcaactg
gagagaaaaatgatcagtacttttgatctctctcgtcgtatggggctattatga
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integrated database retrieval system