Pectobacterium parmentieri SCC3193: W5S_1665
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Entry
W5S_1665 CDS
T02514
Name
(GenBank) Putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03420
Nucleotide excision repair
pec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W5S_1665
03430 Mismatch repair
W5S_1665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_1665
Enzymes [BR:
pec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W5S_1665
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W5S_1665
MMR (mismatch excision repair)
Other MMR factors
W5S_1665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_12
UvrD_C_2
AAA_19
Viral_helicase1
YflT
Ets
Motif
Other DBs
NCBI-ProteinID:
AFI89757
UniProt:
A0A0H3I143
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All DBs
Position
1808265..1809494
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AA seq
409 aa
AA seq
DB search
MRSLAIKIIKLNPDIAKVFSISYSHVFIDEFQDTRSDQYELIKLLFLNNKTILVAVGDIN
QSIMLWADACPTVFRDFQNDFLAKNKFLLKNYRSSKEIQDVLSCFISFIDSSHEPNMVKN
KPENCSIHVYDNEYKEADDLVHKLKELIASGVNEKDICVLTKQQSSLYTSVLRDKLTQTG
INNLDMTDLQDFLKEPLGRIFSSLFSIYTDKSHSSYREFCDLYLEVNNVSSGDEQEADLI
RKLSYHLSESKSTLSVDSNADSIVSSINKTLKFIQIGKVVSKWGQYKSKSFRDKVWSNLE
YHLRYTIDTTNSLSEASKMFRAENCVQLMNIHKCKGLEYKVVVFLGIEDQAFWKYSPENF
EDKCAIYVALSRAKNKIIITTAKNREFRLNGRYDNRTSEYVKVKEIYNF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagatctctcgctattaaaataattaaattaaatcctgatatagcgaaggttttttcg
ataagctacagccatgtttttattgatgaatttcaagatacgaggtctgatcaatatgaa
ttaataaagttattatttttgaataataaaactatattagttgctgttggggatataaat
caaagtataatgctttgggctgatgcttgtcctacagtctttagagattttcaaaatgat
tttttagcgaagaacaaatttttattaaagaattaccggtcaagtaaagaaatacaagat
gttctgtcatgctttatcagttttatcgactcttcccatgagcctaatatggttaagaat
aaaccagagaattgctctattcatgtttatgataatgaatataaagaagctgatgatttg
gttcataaactgaaagaactgatagcttctggagtaaatgaaaaagatatttgtgtttta
acaaagcaacaatcctctttatacacatctgttcttagagataagttaacacaaactgga
attaataatcttgacatgacagatctccaagattttttaaaagaacctttaggcaggata
ttttccagtttatttagtatttatactgataaatcgcactccagctatagagagttttgt
gacttatatttggaagtgaataatgttagtagcggtgatgaacaggaggccgatcttatt
agaaaattgtcttaccatctttcagagagtaaatctacactttctgttgattctaatgct
gattcgatagtaagttcaattaacaaaaccctcaaatttatccaaataggaaaagtagtt
tcaaaatggggacagtataaatctaaatctttcagagataaagtctggagtaaccttgaa
tatcatttacgttataccattgatactacaaactccttatcagaagcatcgaagatgttc
agagctgaaaattgtgttcaattaatgaatatacataaatgtaaaggcttggaatataaa
gttgttgttttccttggtattgaagatcaagctttttggaaatattctccagaaaacttt
gaagataagtgtgctatttatgtggctttatcaagagcaaaaaataaaatcattattact
acagctaagaatagagaatttagattgaatgggcgatatgacaacagaacatcggaatat
gttaaagtaaaagaaatatataatttttaa
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