Pectobacterium parmentieri SCC3193: W5S_2110
Help
Entry
W5S_2110 CDS
T02514
Name
(GenBank) Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Organism
pec
Pectobacterium parmentieri SCC3193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GAF
PAS_4
PAS_8
Diguanyl_cycl_sensor
GAF_EFCB5_1st
Motif
Other DBs
NCBI-ProteinID:
AFI90199
UniProt:
A0A0H3I4F6
LinkDB
All DBs
Position
2294821..2296989
Genome browser
AA seq
722 aa
AA seq
DB search
MSRAPISKDEDKRLAALREYGIKNALFDPSLSNLISLAANIFNAPIVLVSLVEAERQLFA
ASVGVPFCETPRDISFCAHTILKKKIMVVPDALKDVRFKNNPLVVGIPYIRFYAGIPLIT
SSGHAIGTLCIIDLKPRAAFTKRDEHNLQDLASLVMDKLEMRRLELARKASQVRFENIAN
TSPDTILCVNEKGMITFWNAAAEKMLEYRDDEIIGQNINRIVPDAFIVQLNHLVTDRDSL
MKGVTLELNVQAKSGSLVPVELSVSMWEDNDNVSYGAILRDITERRRNEERLFLLAHMDP
LTGLANRTLLTSNLETALKNEPAVCIMMVDLDGFKDVNDSLGHSSGDDILVHVAKKIKAT
VRSGDVVARMGGDEFALLFPGLSDKKVAGKIAEQIIHEISQAMIIDDHQINISASIGAVL
YPEYGVTVQDLLTSADLALYQAKSEGRNCYRFFTRELLEVFQAKHAFQLEFVRAYEQHEF
EMFYQPQVKLATNEIVGAEALLRWRHPERGLLGPAAFLTALENGPWAERVGDWIVETACR
QAAEWCQVSNSYFRISINLFSAQFRTGMLAQKIMSALARTGLQPSSLELEITENIILRYD
ENMLQPLKTLRDAGIGIAFDDYGTGYASLSMLKNYPVTRLKIDQTFVRTMCESPPDAAIV
RAILYLGKSFGLGVIAEGVETLEQSERLRGKGCEEAQGYLFGHPMPAEEFTQLLKLNKPI
DV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgccccaataagcaaagatgaagataaacgtcttgctgctcttcgtgagtat
ggaattaagaacgcactattcgatccgagtctgagcaacctgattagtctggctgccaac
atttttaacgcgcccatcgttttagtctcgttggtggaagctgagcgccaattgtttgcc
gccagcgtaggggttcctttttgcgaaacaccacgcgatatctccttttgcgcccatacg
atcttgaagaaaaagatcatggtggtgcctgatgcactcaaggatgtgcgattcaaaaat
aatccgctggttgtgggaattccctatatccgtttttatgccgggatacccttaattacc
tcgtctgggcatgccattggcacgttatgtattattgatttgaagcccagagcagcattc
accaagcgtgatgagcacaatttgcaggatctggcatcactggtcatggacaagctggaa
atgcggcgtctggaattggcgcgtaaggccagtcaggtgcgttttgaaaatatcgctaat
acctcgccagatacgattttatgcgttaacgagaagggaatgattaccttctggaatgca
gccgcagagaagatgctggaataccgcgacgatgaaattatcggccaaaatattaatcgc
atcgtacctgatgcctttatcgtgcagcttaaccatctggtcactgaccgtgattccctg
atgaaaggggtgacgctggagctgaacgtacaagccaaaagcggtagcctggttccggtt
gaattgtcggtttctatgtgggaagacaacgacaatgttagctatggcgcgatattgcgc
gacattaccgagcgtcgccgcaacgaagagcggctgtttttactggcgcacatggaccca
ctgacggggttggcaaaccggacattattaacatcaaatctggaaaccgcgctcaagaat
gagcctgcagtctgcatcatgatggtcgatctggacggatttaaagatgttaatgacagt
ctggggcactctagcggcgatgatattttggtgcacgttgccaaaaaaataaaagcgacg
gttcgttccggtgatgtagtcgcgagaatgggcggagatgaatttgcgctgctgtttccg
ggtctgagtgataaaaaagttgcaggtaaaattgccgaacaaattatccatgaaatttcg
caggcaatgattattgacgatcaccaaatcaatattagtgccagcattggtgctgtgctg
tacccggaatatggcgtcaccgtgcaggatcttttgaccagtgcagatttagctctgtat
caggcgaaatctgaaggtcggaactgttatcgttttttcacgcgcgaactacttgaagtc
tttcaggctaagcatgccttccagttagagtttgtacgagcttatgagcagcatgaattt
gaaatgttctatcaaccacaggtaaaactggcaacaaatgagattgttggtgcggaggca
ttgttacgctggcgtcacccagagagagggctacttgggcctgcagcatttcttaccgca
ctggaaaatggcccgtgggcggaacgagtaggggattggatcgtagaaacggcctgtcgg
caagcggcagagtggtgtcaggttagcaacagctattttcgtatcagcattaaccttttc
agcgcgcagtttcgtacaggcatgttggcgcaaaagattatgagtgccctcgctcgtacc
gggttacagccaagttcgctggagctggaaatcacggaaaatatcattctgcgttacgat
gaaaatatgttacagccattgaaaacgctgcgtgatgcggggatcgggattgcctttgat
gactatgggacgggctatgcgtcgctcagtatgctgaaaaattacccggtgactcggctt
aagatcgatcaaacctttgtcaggaccatgtgtgagtctccgccggatgcggcgattgtc
agagcaattctctatcttgggaaaagtttcggtctcggcgtgattgcagaaggggttgag
actttggagcagagtgaacgactgcgaggcaaagggtgtgaagaagcacagggatatctg
tttgggcatccgatgcccgcagaagaatttacccagctactgaagttgaataaaccaata
gacgtgtaa
DBGET
integrated database retrieval system
