Pectobacterium parmentieri SCC3193: W5S_2117
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Entry
W5S_2117 CDS
T02514
Name
(GenBank) Oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00040
Pentose and glucuronate interconversions
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W5S_2117
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
W5S_2117
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Motif
Other DBs
NCBI-ProteinID:
AFI90206
UniProt:
A0A0H3I8E7
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All DBs
Position
2304921..2306087
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKAQNATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLVTGEA
ETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDRQLRIMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaacaagattcccctaacgttccatacctatcaggattcagcaactggc
accgaagttgtgcgtttaaccccgcccgatgttatctgccaccgcaactatttctaccag
aaatgtttcttcaatgacggcagcaaactgctgtttggtgcggcatttgatggtccatgg
aattactatctactggatttaaaagcgcagaatgccacgcagttgacggaaggcaaaggc
gacaacactttcggtggtttcctgtccccgaatgacgatgcgctgtattacgttaaaaat
acccgtaatctgatgcgtgtcgatctggctacgctggaagagaaaaccatttatcaggtg
cctgacgattgggtcggttacggtacgtgggttgccaattccgattgcactaagatggtc
ggtattgagatcaaaaaagaagactggaaaccactgaccgattggaaaaaattccaggag
ttctatttcactaatccttgctgccgcctgattcgcgtcgatttggtaacaggcgaagcg
gagacgatccttcaggagaatcagtggctgggtcacccaatctaccgtccgggtgatgac
aacacggtcgctttctgccacgaaggcccgcacgatctggttgatgcccgtatgtggttc
atcaacgaagacggtaccaacatgcgtaaagtgaaagagcatgctgaaggcgaaagctgt
acccacgaattctgggtaccagatggttccgcgatgatttacgtctcttaccttaaagac
gatactaaccgctatatccgcagtatcgatcccgtgacgctggaagatcgtcaattgcgc
atcatgccaccgtgttctcacctgatgagtaactatgatggcacgctgttggttggtgac
ggttccgatgcaccagtcgacgtgcaggatgatggtggctacaagattgagaacgatccg
ttcctgtatgttttcaacctgaaaactggcaaagaacaccgtattgcacagcacaataca
tcctgggaagtgttggaaggcgaccgtcaggttactcacccacacccttctttcacgccg
gataataaacaagtcctgtttacttctgacgtagatggaaagcctgcgctgtatctggcg
aaggttcctgattcagtctggaactaa
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