Pectobacterium parmentieri SCC3193: W5S_2118
Help
Entry
W5S_2118 CDS
T02514
Name
(GenBank) Transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_2118
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
IclR family
W5S_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HTH_5
TrmB
HTH_11
MarR_2
Fe_dep_repress
MarR
Mga
FUR
HTH_45
Rrf2
PadR
HTH_26
HTH_6
HTH_34
Dimerisation2-like_dom
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AFI90207
UniProt:
A0A0H3I2C4
LinkDB
All DBs
Position
2306303..2307094
Genome browser
AA seq
263 aa
AA seq
DB search
MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSALTRETIHLGALDEDGIVY
IHKIDSMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDRGEVEEVLSTVEFTRSTPHTLCSA
EDLLNQLDIVREQGFGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEDNKHE
YVATLHTAARNISEQMGYHDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatttagataaacaacccgattccgtgtcgtccgttttaaaggttttt
ggtattttgcaggcattaggtgaagagagagaaattggtattaccgagctttctcagcgc
gtgatgatgtccaagagtaccgtttaccgcttcttgcagacgatgaaatccctgggctat
gttgcgcaggaaggtgaatcggagaaatattcgctgacgctcaagttgtttgaacttggt
gcaaaagcattgcagaacgtagatttaatccgcagtgcggatatacagatgcgagagttg
tctgcgctaacgagggaaacgatccacctcggcgcgttggatgaagacggcatcgtttat
atccacaaaattgactcgatgtataacctacgcatgtattcgcgtattggtcgtcgtaac
ccgctgcacagcactgcaattggtaaagtgctattagcatggcgcgatcgtggtgaagta
gaagaagtcctgtcgaccgtcgaattcactcgtagtacaccgcatacgctgtgttctgct
gaagatcttcttaatcaattggatatcgtacgtgagcaaggcttcggtgaagataacgaa
gaacaggaagaagggctacgttgtatcgctgtgccggtattcgaccgcttcggtgttgtg
attgctgggctcagtatttctttcccaaccattcgtttttcagaagacaataaacacgaa
tatgtggctacgctgcacaccgcagccagaaatatttctgagcagatgggttaccacgat
taccctttctga
DBGET
integrated database retrieval system
