Pectobacterium parmentieri SCC3193: W5S_2143
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Entry
W5S_2143 CDS
T02514
Name
(GenBank) Pectate disaccharide-lyase
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00040
Pentose and glucuronate interconversions
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W5S_2143
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
W5S_2143
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Nop52
Motif
Other DBs
NCBI-ProteinID:
AFI90232
UniProt:
A0A0H3I2E8
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All DBs
Position
complement(2330880..2332511)
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AA seq
543 aa
AA seq
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MSIFENLYTSKKSQLDEWVAALDSHIACVQDKGRSQSQPTPLLADGFDVENYAPVVWQFP
DGHSAPISNFASQQNWLRTLCAMSAVTDDDSYQQYAIAQSEYFLEHFVDNNSGLFYWGGH
RFINLDTLEGEGPESKAQVHELKHHLPYYSLLHRVNAEKTLNFFQGFWNAHVENWESLDL
GRHGDYSKKRDPNVFLHNRHDVVDPAQWPTLPLTKGLTFVNAGTDLIYAAFKYAEYTGDS
HAAAWGKHLYRQYVLARNPETGMPVYQFSSPQQRQPVPEDDNQTQSWFGDRAQRQFGPEF
GKIAREANVLFRDMRPLLIDNPLAMLDILRTQPDAEMLDWVISGLKNYYQYAYDVTSNTL
RPMWNNGQDMTGYRFQRDGYYGKAGTELKPFALEGDYLLPLVRAYRLSGDEDLYALVNTM
LTRLNKENIQDIASPMLLLTVIELADHKQSESWAHYAAQLAGILFEQHFHHGLFVRSAQH
RYVRLDDTYPLALLTFVAACRNKLNAIPPFLTQGGYVHGDFCVNGENRIVYDVELIYPEL
LTA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttgaaaatttatacaccagcaagaaatcgcagctcgacgaatgggttgcc
gcgcttgatagccacatcgcttgcgtacaggataaaggtcgcagccagagtcaacctacg
ccattgctggcagatggttttgatgtggaaaattatgcgcctgtagtatggcaattccct
gatggacatagcgcacctatttctaattttgccagccagcaaaattggctaagaacactg
tgtgccatgagcgccgttaccgatgatgatagttaccaacaatacgctattgcacaaagc
gaatattttctggaacactttgttgataataatagtggcctattctactggggcggccac
cgctttattaatctggatacgttagaaggcgaaggcccagaatccaaagcgcaggtgcat
gaattaaagcatcacctgccttattattcgctgttacatcgcgttaatgcggaaaagacg
ctgaatttctttcagggtttctggaacgcgcacgttgaaaactgggaatcattggacttg
ggtcgccatggcgattacagcaaaaaacgcgatcccaatgtgttcctgcataaccgtcat
gatgttgtcgatccagcacagtggcctactctgccattaacgaaaggattgacgtttgtt
aatgctggcacggacctgatttacgctgcattcaaatatgcagaatacacgggtgatagc
catgcagcggcttggggtaagcacctttatcgccaatatgttctggctcgtaacccagaa
accggcatgccggtgtatcagttcagctcaccacagcagcgccagcctgtaccagaggat
gataaccagacgcaatcctggtttggcgatcgtgctcaacgccagtttggccctgagttc
ggcaaaattgcgcgtgaagccaatgtgctgttccgcgatatgcgcccactgctgattgat
aacccactggccatgctggatatcctccgcactcagcctgatgctgaaatgctggattgg
gtgatctctggattaaaaaattattatcagtatgcctacgatgtcaccagcaatacgctg
cggccaatgtggaataacggccaagatatgacaggctaccgttttcaacgcgatgggtat
tacggcaaagcgggaacagaattaaaaccgtttgcattagaaggcgattatctattacca
ctggttcgtgcctatcgcctgagcggcgatgaggatctgtatgcgctggttaacacgatg
ctgacgcgactgaataaagaaaatattcaggacatcgccagcccaatgcttctgttgacc
gttattgagctagccgatcacaaacaatcagaatcctgggcacattatgccgcacagttg
gcgggcattctgtttgaacaacacttccatcatggtttgtttgttcgctctgcacagcat
cgttatgttcgtctggatgatacttatccgctggctctactgactttcgttgccgcttgt
cgcaacaaattaaacgctattccaccgttcttgacgcaaggtggatatgttcacggtgat
ttttgcgttaacggggaaaatagaattgtttatgacgtggagttaatttatccagagtta
ttaacggcttaa
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