Pectobacterium parmentieri SCC3193: W5S_2226
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Entry
W5S_2226 CDS
T02514
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pec03036
]
W5S_2226
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_2226
Chromosome and associated proteins [BR:
pec03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
W5S_2226
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W5S_2226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
HAUS-augmin3
DUF6626
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
AFI90314
UniProt:
A0A0H3I4X8
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All DBs
Position
complement(2407141..2407548)
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AA seq
135 aa
AA seq
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MSEALKILNNIRTLRAQARECTLDTLEEMLEKLEVVVNERREEDSQVQAEVEERARKLQQ
YREMLIADGIDPNELFQSLGSVKVAGKSKRAARPAKYQYTDENNEVKTWTGQGRTPAVIK
KAIEEQNKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcactaaaaattcttaacaacatccgtactctgcgtgcccaggctagagaa
tgtaccctggatactttagaagaaatgctggaaaaactggaagtcgtggttaatgaacgc
cgcgaagaagatagccaggttcaggctgaagttgaagaacgtgcgcgtaaattgcaacaa
tatcgcgagatgctgattgccgatggtattgaccctaacgaattattccagtctttaggt
tcagtgaaagttgcaggtaaaagcaaacgcgctgcccgtcctgcaaaatatcaatacact
gacgaaaacaacgaagttaaaacctggactggtcaaggtcgtacaccagcagtgatcaaa
aaagcaatcgaagagcaaaacaagtctttagacgatttcctgctgtaa
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