Pectobacterium parmentieri SCC3193: W5S_2233
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Entry
W5S_2233 CDS
T02514
Name
(GenBank) Oligopeptide ABC transporter, ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec01501
beta-Lactam resistance
pec02010
ABC transporters
pec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W5S_2233
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W5S_2233
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
W5S_2233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_2233
Transporters [BR:
pec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
W5S_2233
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ATP-synt_ab
DO-GTPase2
CbiA
ABC_ATPase
AAA_29
DUF87
Motif
Other DBs
NCBI-ProteinID:
AFI90321
UniProt:
A0A0H3I8Q4
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All DBs
Position
2417721..2418716
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AA seq
331 aa
AA seq
DB search
MSKIELTGAHDALLHVQDLRVTFKTQDGDVTAVNDLNFTLNAGETLGIVGESGSGKSQTA
FALMGLLARNGRIGGSARFRGKEILNLPENQLNKLRAEEISMIFQDPMTSLNPYMRVGEQ
LMEVLMLHKRLSKSEAFEESVKMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCR
PKLLIADEPTTALDVTVQAQIMTLLNDLKREFNTAIIMITHDLGVVAGICDKVLVMYAGR
TMEYGVARDVFYHPSHPYSVGLLNAVPRLDAEDEVLATIPGNPPNLLRLPKGCPFQPRCP
YSMDVCHSTPALESFGDGRLRACFRAIEEVV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaattgagttaacgggcgcgcacgacgcgctgctacatgttcaggatctacgg
gtaacgttcaagacgcaagatggggacgtgacggcggttaacgacttgaatttcacactc
aatgctggtgaaacactggggattgtcggtgaatcaggttcgggtaaatcgcagacggcg
ttcgcgttgatgggattgctggcccgcaatggtcgtattggcggttcggcgcgttttcgt
ggcaaagagatcctcaatttaccggaaaaccaactgaataagctgcgtgctgaagaaatc
agtatgattttccaggacccgatgacttcactgaacccttacatgcgcgtcggtgagcaa
ctgatggaagtactgatgttgcacaaacgcctgagcaaaagtgaagcgtttgaagagtcg
gtcaaaatgctggatgcagtcaaaatgccggaagcgcgtaagcgtatgaagatgtatccg
catgaattttctggtgggatgcgccagcgcgtgatgattgcgatggcgctgttgtgccga
ccgaaactgttgattgccgatgaaccgacaacggcattggatgtgacggttcaggcgcag
attatgacgctgttgaacgatctgaagcgcgagtttaataccgccatcatcatgatcacg
catgatctgggtgtggttgccggtatttgtgacaaagtgctggtgatgtacgcggggcgc
accatggaatatggcgtcgcacgcgatgtcttttatcatccgagccacccatattctgtt
ggtctgctcaacgctgtgccgcgtctggatgcggaagatgaggtgctggcgaccattcca
ggtaatccgcctaacttattacgcttgccgaaagggtgcccgttccaaccacgctgcccg
tattcaatggatgtctgccacagcacaccggcattggaatcttttggtgatggccgcttg
cgcgcctgctttagagcgattgaggaggtggtatga
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