Pectobacterium parmentieri SCC3193: W5S_2234
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Entry
W5S_2234 CDS
T02514
Name
(GenBank) Oligopeptide ABC transporter, ATP-binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec01501
beta-Lactam resistance
pec02010
ABC transporters
pec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W5S_2234
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W5S_2234
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
W5S_2234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_2234
Transporters [BR:
pec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
W5S_2234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
nSTAND1
TniB
MobB
AAA_29
GlgX_C
RsgA_GTPase
NACHT
NB-ARC
AAA_13
ATP-synt_ab
AAA_16
AAA
NPHP3_N
MMR_HSR1
RNA_helicase
Yos1
nSTAND3
PRK
DUF87
Motif
Other DBs
NCBI-ProteinID:
AFI90322
UniProt:
A0A0H3I2R8
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All DBs
Position
2418713..2419741
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AA seq
342 aa
AA seq
DB search
MNNADEKKVLLEVDDLKVHFDVRDDKQWFWQPPKKLKAVDGVTLRLYEGETLGVVGESGC
GKSTLARAIIGLVKATDGRVTWLGKDLLGMSADQWRAARSDIQMIFQDPLASLNPRMNIG
EIIAEPLKVYHPELDRQAVKDRVKAMMLKVGLLPSLINRYPHEFSGGQCQRIGIARALIL
EPKLIICDEPVSALDVSIQAQVVNLLRQLQREMRLSLIFIAHDLSVVKHISDRVLVMYLG
HAVELGTYDQVYQNPQHPYTRALMSAVPIPDPDQERNKKIQLLEGDLPSPINPPSGCVFC
TRCPVVGPECSKTRPLLEGSFTHAVSCLKVDPQALLPETEAQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcggacgaaaaaaaggtgttattagaagtggacgatctgaaagttcacttt
gatgtcagagatgataagcagtggttctggcagccgcctaaaaaactgaaagcggtcgat
ggcgtaacgctgcgcttatatgaaggtgaaacgctgggcgtggtaggggaatctggctgc
ggtaagtctacgctggcgcgtgccattatcgggctggtaaaagcgactgacggacgcgtc
acctggctggggaaagacctgctgggcatgagtgccgatcagtggcgtgcagcacgtagc
gatattcagatgatatttcaggacccgttggcgtcgctgaatcctcgtatgaacattggc
gaaattattgccgaaccgttgaaagtgtatcatccagagcttgatcggcaggcggtaaaa
gatcgtgtgaaagcgatgatgctgaaggtcgggctgctgcctagcctgattaaccgttat
ccacatgaattctctggtgggcagtgccagcgtattggtatcgcccgcgcgctgatcctg
gagccgaagctgattatctgtgatgaaccggtttcagcgctggacgtatcgattcaggca
caggtggttaacctgctgcgtcagttacagcgcgaaatgcgcctgtcgctgattttcatc
gctcatgacttatcggtagtgaaacacatttccgaccgcgtattagtgatgtatctgggc
catgcggtagagctgggcacctacgatcaggtctatcaaaacccgcagcacccgtatacc
cgtgcgctgatgtccgcggtaccgattcccgatcccgatcaggaacgtaacaagaagata
cagctactggaaggggacttgccttcaccgatcaatccgccatccggttgcgtattctgc
acccgttgtccggttgttggccctgagtgctcgaaaacccgtccattactggaagggagt
tttacgcacgcagtctcatgcctgaaggtcgatccgcaggcgctgttaccggaaacagaa
gcgcagtaa
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