Pectobacterium parmentieri SCC3193: W5S_2364
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Entry
W5S_2364 CDS
T02514
Name
(GenBank) Galactitol utilization operon repressor
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_2364
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
W5S_2364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
GTP_EFTU_D4
HTH_5
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
AFI90452
UniProt:
A0A0H3I354
LinkDB
All DBs
Position
complement(2546410..2547219)
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AA seq
269 aa
AA seq
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MNNTDAATDKRVTGTSERREQIIQRLRQQGSVQVNDLSLFFGVSTVTIRNDLAFLEKQGI
AVRAYGGALVCDSGTAPVEPTVEDKSSLNTSLKRSIARVAANLIKPGHRVILDSGTTTYE
IARHMRNHKEVIAMTNGMNVANALLEAEGVELLTTGGHLRRQSLSFYGDQAEQSLQNYHF
DMLFLGVDAIDLERGISTHNEDEARLNRRMCEVAERIIVVTDSTKFNRSSLHKIIDTHKI
HMVIIDAGIPTESLNGLRKGGIEVVLVGE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaataataccgatgcagcaacggacaagcgtgtaacgggtacaagtgaaaggcgtgaa
cagattattcagcgtcttcgtcaacagggaagcgtacaggttaatgatctatcattattt
tttggtgtttctaccgtcactatccgtaacgacttagcttttctggaaaagcaaggtatt
gcggtacgtgcctatggcggcgcattagtttgcgattcgggcactgcgccggttgaaccc
accgttgaagacaaaagttctctaaatacgtctctgaaacgcagtattgctcgcgttgcg
gccaaccttatcaaaccaggccatcgtgtgattttagattccggcaccactacttatgaa
atagcgcgccacatgcgtaaccataaagaagtgattgccatgaccaacggcatgaatgtg
gcgaatgcgttactcgaagcagaaggtgtggaactgttgacgaccggggggcacttgcgc
cgtcagtcgctctcattctatggcgatcaggccgagcaatccctgcaaaattaccacttc
gatatgctattccttggggtggatgctatcgaccttgagcgtggcatcagtacccataac
gaagatgaagcgcgtcttaaccgccgaatgtgtgaagtggcagagcgcattattgtcgtg
acggactccactaagtttaaccgttccagtctgcataaaatcattgatacccataaaatt
catatggttatcattgatgcggggatcccaactgaaagcttgaatgggctacgtaaaggc
gggattgaagtggtactggttggtgaatag
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