Pectobacterium parmentieri SCC3193: W5S_2383
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Entry
W5S_2383 CDS
T02514
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00541
Biosynthesis of various nucleotide sugars
pec01100
Metabolic pathways
pec01250
Biosynthesis of nucleotide sugars
Module
pec_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
W5S_2383
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_2383
Enzymes [BR:
pec01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
W5S_2383
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Lipid A
W5S_2383
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFI90471
UniProt:
A0A0H3I945
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All DBs
Position
complement(2567534..2568388)
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AA seq
284 aa
AA seq
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MTNKVVKIGDIPVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEAHQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKQASNGAPVIFDVTHALQCRDPFGAASGGRRGQVTELARAGMAVGLAGLFIEA
HPDPANAKCDGPSALPLDKLEPFLQQIKAIDDLVKNFPELDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagtggtcaagataggggatatccccgttgccaacgatctgccttttgta
ctgtttggcggcatgaatgttcttgaatcacgcgatctggcaatgcgcatttgtgagcat
tacgtcacggtcacgcagaagttaggtattccttacgtgttcaaggcgtcattcgataag
gctaaccgctcctcgattcactcttaccgtggtcctggtctggaagaagggatgaaaatc
tttcaggaactgaaacagacctttggcgtaaaaattattactgacgtgcatgaagcacat
caggcgcagcccgttgcggatgtggttgatgtgatccagcttcctgcgtttttagcacgc
caaaccgatctggtagaagcgatggcgaaaaccggtgcggtgatcaacgtaaaaaaaccg
cagttcgtcagcccaggtcaaatgggtaatatcgtcgataaatttatcgagggcggtaac
gatcaggtgatcctgtgtgaccgcggcagcaactttggttacgacaatctggttgttgat
atgctgggcttcaatgttatgaagcaggcttccaacggtgccccggtaatttttgacgtt
acgcatgcgctacagtgccgcgacccgtttggtgcagcatccggtggccgtcgtgggcaa
gtgaccgaactggcgcgcgctggtatggcggtaggtttggcggggctgtttattgaagct
caccccgatcctgctaacgcgaagtgtgatggcccatccgcgctgccgctggataaacta
gaaccattcctgcaacaaataaaagcgattgacgatctggttaaaaacttcccagaattg
gataccagcaaataa
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